Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF34Q969K3 AP006288.1-201ENST00000446065 395 ntBASIC17.12■□□□□ 0.33
RNF34Q969K3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF34Q969K3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF34Q969K3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF34Q969K3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RNF34Q969K3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF34Q969K3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 AL662844.4-201ENST00000606367 2838 ntBASIC17.12■□□□□ 0.33
RNF34Q969K3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF34Q969K3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF34Q969K3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF34Q969K3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF34Q969K3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RNF34Q969K3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF34Q969K3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.11■□□□□ 0.33
RNF34Q969K3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF34Q969K3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF34Q969K3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF34Q969K3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF34Q969K3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF34Q969K3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF34Q969K3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
RNF34Q969K3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF34Q969K3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF34Q969K3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RNF34Q969K3 AC007326.2-201ENST00000624224 7579 ntBASIC17.11■□□□□ 0.33
RNF34Q969K3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF34Q969K3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF34Q969K3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF34Q969K3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF34Q969K3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RNF34Q969K3 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF34Q969K3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF34Q969K3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF34Q969K3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF34Q969K3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF34Q969K3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF34Q969K3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
RNF34Q969K3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF34Q969K3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF34Q969K3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RNF34Q969K3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF34Q969K3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF34Q969K3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF34Q969K3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF34Q969K3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF34Q969K3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF34Q969K3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF34Q969K3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF34Q969K3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
RNF34Q969K3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF34Q969K3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF34Q969K3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RNF34Q969K3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF34Q969K3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF34Q969K3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RNF34Q969K3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF34Q969K3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF34Q969K3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RNF34Q969K3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RNF34Q969K3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RNF34Q969K3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RNF34Q969K3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RNF34Q969K3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.1■□□□□ 0.33
RNF34Q969K3 KRT8P23-201ENST00000560090 1207 ntBASIC17.1■□□□□ 0.33
RNF34Q969K3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.1■□□□□ 0.33
RNF34Q969K3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF34Q969K3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF34Q969K3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RNF34Q969K3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 AC099398.1-201ENST00000567919 2776 ntBASIC17.1■□□□□ 0.33
RNF34Q969K3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.1■□□□□ 0.33
RNF34Q969K3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF34Q969K3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms