Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HPS1Q92902 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HPS1Q92902 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HPS1Q92902 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HPS1Q92902 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.07■□□□□ 0
HPS1Q92902 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.07■□□□□ 0
HPS1Q92902 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.07■□□□□ 0
HPS1Q92902 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.07■□□□□ 0
HPS1Q92902 RN7SL718P-201ENST00000581254 303 ntBASIC15.07■□□□□ 0
HPS1Q92902 BNIP3P18-201ENST00000593976 575 ntBASIC15.07■□□□□ 0
HPS1Q92902 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HPS1Q92902 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HPS1Q92902 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HPS1Q92902 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HPS1Q92902 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
HPS1Q92902 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
HPS1Q92902 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.07■□□□□ 0
HPS1Q92902 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.07■□□□□ 0
HPS1Q92902 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
HPS1Q92902 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
HPS1Q92902 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.06■□□□□ 0
HPS1Q92902 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.06■□□□□ 0
HPS1Q92902 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
HPS1Q92902 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.06■□□□□ 0
HPS1Q92902 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
HPS1Q92902 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.06■□□□□ 0
HPS1Q92902 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HPS1Q92902 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HPS1Q92902 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.06■□□□□ 0
HPS1Q92902 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.06■□□□□ 0
HPS1Q92902 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
HPS1Q92902 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.06■□□□□ 0
HPS1Q92902 AC091607.1-201ENST00000490318 1060 ntBASIC15.06■□□□□ 0
HPS1Q92902 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.06■□□□□ 0
HPS1Q92902 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
HPS1Q92902 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.06■□□□□ 0
HPS1Q92902 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.06■□□□□ 0
HPS1Q92902 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 BX640515.1-201ENST00000617215 977 ntBASIC15.06■□□□□ 0
HPS1Q92902 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.06■□□□□ 0
HPS1Q92902 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.06■□□□□ 0
HPS1Q92902 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.06■□□□□ 0
HPS1Q92902 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 HLA-A-201ENST00000376802 1334 ntBASIC15.06■□□□□ 0
HPS1Q92902 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HPS1Q92902 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.06■□□□□ 0
HPS1Q92902 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HPS1Q92902 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.06■□□□□ 0
HPS1Q92902 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
HPS1Q92902 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HPS1Q92902 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.05■□□□□ 0
HPS1Q92902 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HPS1Q92902 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.05■□□□□ 0
HPS1Q92902 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
HPS1Q92902 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HPS1Q92902 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.05■□□□□ 0
HPS1Q92902 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.05■□□□□ 0
HPS1Q92902 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.05■□□□□ -0
HPS1Q92902 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HPS1Q92902 MRPL3P1-201ENST00000400109 1033 ntBASIC15.05■□□□□ -0
HPS1Q92902 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.05■□□□□ -0
HPS1Q92902 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.05■□□□□ -0
HPS1Q92902 AP000347.1-202ENST00000435868 847 ntBASIC15.05■□□□□ -0
HPS1Q92902 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.05■□□□□ -0
HPS1Q92902 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms