Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
AP3S1Q92572 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.46□□□□□ -0.1
AP3S1Q92572 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
AP3S1Q92572 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
AP3S1Q92572 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.45□□□□□ -0.1
AP3S1Q92572 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.45□□□□□ -0.1
AP3S1Q92572 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.45□□□□□ -0.1
AP3S1Q92572 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.45□□□□□ -0.1
AP3S1Q92572 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
AP3S1Q92572 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.45□□□□□ -0.1
AP3S1Q92572 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
AP3S1Q92572 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
AP3S1Q92572 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
AP3S1Q92572 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.45□□□□□ -0.1
AP3S1Q92572 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.45□□□□□ -0.1
AP3S1Q92572 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.45□□□□□ -0.1
AP3S1Q92572 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.45□□□□□ -0.1
AP3S1Q92572 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
AP3S1Q92572 NUS1P1-201ENST00000446295 882 ntBASIC14.45□□□□□ -0.1
AP3S1Q92572 SIGLEC30P-201ENST00000455569 941 ntBASIC14.45□□□□□ -0.1
AP3S1Q92572 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.45□□□□□ -0.1
AP3S1Q92572 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.45□□□□□ -0.1
AP3S1Q92572 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.45□□□□□ -0.1
AP3S1Q92572 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.45□□□□□ -0.1
AP3S1Q92572 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.45□□□□□ -0.1
AP3S1Q92572 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.45□□□□□ -0.1
AP3S1Q92572 AD001527.2-201ENST00000622994 785 ntBASIC14.45□□□□□ -0.1
AP3S1Q92572 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
AP3S1Q92572 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.45□□□□□ -0.1
AP3S1Q92572 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 TOP3BP1-201ENST00000420768 1380 ntBASIC14.45□□□□□ -0.1
AP3S1Q92572 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
AP3S1Q92572 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
AP3S1Q92572 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AP3S1Q92572 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.44□□□□□ -0.1
AP3S1Q92572 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.44□□□□□ -0.1
AP3S1Q92572 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.44□□□□□ -0.1
AP3S1Q92572 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.44□□□□□ -0.1
AP3S1Q92572 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
AP3S1Q92572 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.44□□□□□ -0.1
AP3S1Q92572 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.44□□□□□ -0.1
AP3S1Q92572 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.44□□□□□ -0.1
AP3S1Q92572 AL359075.1-203ENST00000462729 1002 ntBASIC14.44□□□□□ -0.1
AP3S1Q92572 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.44□□□□□ -0.1
AP3S1Q92572 GUSBP12-201ENST00000513727 720 ntBASIC14.44□□□□□ -0.1
AP3S1Q92572 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 AC010654.1-201ENST00000615722 808 ntBASIC14.44□□□□□ -0.1
AP3S1Q92572 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
AP3S1Q92572 AL590326.2-201ENST00000625139 305 ntBASIC14.44□□□□□ -0.1
AP3S1Q92572 AL031432.5-201ENST00000641059 760 ntBASIC14.44□□□□□ -0.1
AP3S1Q92572 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.44□□□□□ -0.1
AP3S1Q92572 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.44□□□□□ -0.1
AP3S1Q92572 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AP3S1Q92572 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
AP3S1Q92572 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms