Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 AC105339.1-204ENST00000636249 355 ntBASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM3Q8TF72 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 AC007950.2-201ENST00000615045 2347 ntBASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 AC015922.1-201ENST00000421102 1152 ntBASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 AL671277.1-201ENST00000429656 993 ntBASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 GPS2P2-201ENST00000430745 888 ntBASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.6■□□□□ 0.25
SHROOM3Q8TF72 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM3Q8TF72 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms