Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 PRYP5-201ENST00000451909 266 ntBASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 BX276092.5-203ENST00000456199 560 ntBASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 PGM5P2-202ENST00000637225 1043 ntBASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 AC073347.1-201ENST00000421633 2643 ntBASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 AC016027.1-202ENST00000607927 1699 ntBASIC16.37■□□□□ 0.21
RAB3IL1Q8TBN0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 MYO15B-237ENST00000642007 4893 ntBASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 AC013268.4-201ENST00000637413 2228 ntBASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 ABCD1P5-201ENST00000445663 754 ntBASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 PAWRP1-201ENST00000451083 565 ntBASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 NCF1C-201ENST00000438382 1427 ntBASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RAB3IL1Q8TBN0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 AC144831.1-201ENST00000573312 2656 ntBASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms