Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
FNDC9Q8TBE3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
FNDC9Q8TBE3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FNDC9Q8TBE3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FNDC9Q8TBE3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
FNDC9Q8TBE3 GPAA1P2-202ENST00000606848 1787 ntBASIC14.75□□□□□ -0.05
FNDC9Q8TBE3 AC073439.1-201ENST00000624121 1774 ntBASIC14.75□□□□□ -0.05
FNDC9Q8TBE3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FNDC9Q8TBE3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
FNDC9Q8TBE3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
FNDC9Q8TBE3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
FNDC9Q8TBE3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FNDC9Q8TBE3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 MIR346-201ENST00000362234 95 ntBASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 DOC2GP-204ENST00000639052 2548 ntBASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 PCDH8P1-201ENST00000428983 2773 ntBASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 GGT4P-201ENST00000623672 1708 ntBASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
FNDC9Q8TBE3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 AGGF1P2-201ENST00000426656 2106 ntBASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.73□□□□□ -0.05
FNDC9Q8TBE3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms