Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL133215.2-201ENST00000609242 977 ntBASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 AL844908.2-201ENST00000609461 460 ntBASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 AL645728.1-201ENST00000366221 2101 ntBASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 AC092171.3-201ENST00000610122 2651 ntBASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 GAPDHP21-201ENST00000450301 1010 ntBASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 AC008738.7-201ENST00000609744 511 ntBASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 AL662799.1-202ENST00000614205 422 ntBASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 AC087499.5-201ENST00000452760 1342 ntBASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
SHKBP1Q8TBC3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 AC004233.3-201ENST00000607794 1269 ntBASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 AC005915.1-201ENST00000624912 2018 ntBASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SHKBP1Q8TBC3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 AL080243.2-201ENST00000418783 582 ntBASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 AC244107.1-201ENST00000442033 332 ntBASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 AC093724.1-201ENST00000448659 1027 ntBASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms