Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 CNN2P2-201ENST00000443536 909 ntBASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 CNN2P3-201ENST00000450201 906 ntBASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 MIR3197-201ENST00000582241 73 ntBASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 AC015911.4-201ENST00000588022 1070 ntBASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 CYP2A7P1-201ENST00000595391 815 ntBASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 AC092364.2-202ENST00000597012 1073 ntBASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 AL136317.3-201ENST00000618497 906 ntBASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 FAM8A3P-201ENST00000427218 844 ntBASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 GPS2P2-201ENST00000430745 888 ntBASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 LINC01225-203ENST00000563550 1244 ntBASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 AP001059.3-201ENST00000619053 235 ntBASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDND2Q8NHS1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 AC016027.1-202ENST00000607927 1699 ntBASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms