Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 LSM12P1-201ENST00000411836 588 ntBASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 KRT18P11-201ENST00000435214 1283 ntBASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 RARRES2P1-201ENST00000474487 481 ntBASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SPTSSBQ8NFR3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 AC009102.3-201ENST00000623118 1491 ntBASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 LIMCH1-208ENST00000508501 5054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 LIMCH1-217ENST00000512946 5057 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC8.96□□□□□ -0.97
SPTSSBQ8NFR3 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SPTSSBQ8NFR3 PBX2P1-201ENST00000493219 1291 ntBASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms