Protein–RNA interactions for Protein: Q8IWD4

CCDC117, Coiled-coil domain-containing protein 117, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117Q8IWD4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 AC067863.1-201ENST00000494933 530 ntBASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC117Q8IWD4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 AC126755.1-201ENST00000525846 6405 ntBASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 SPDYE7P-202ENST00000420373 878 ntBASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 CNN2P2-201ENST00000443536 909 ntBASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 CNN2P3-201ENST00000450201 906 ntBASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 AP000842.3-202ENST00000569238 1080 ntBASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 AL136317.3-201ENST00000618497 906 ntBASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 AC093028.1-201ENST00000622998 982 ntBASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 AC067930.6-201ENST00000623257 4947 ntBASIC16.98■□□□□ 0.31
CCDC117Q8IWD4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 SNX33P1-201ENST00000592116 1762 ntBASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 SLC25A39P2-201ENST00000537614 270 ntBASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 AC093520.2-201ENST00000561830 333 ntBASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 LINC01225-203ENST00000563550 1244 ntBASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 AC027796.2-201ENST00000575326 344 ntBASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 AC106028.4-201ENST00000614509 607 ntBASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC117Q8IWD4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms