Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 CNN2P11-201ENST00000429351 262 ntBASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 AC105233.2-201ENST00000523697 349 ntBASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 AF228730.5-201ENST00000530288 346 ntBASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 AC073389.1-201ENST00000595595 795 ntBASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 FOXO1B-201ENST00000504678 1527 ntBASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 AC068418.2-201ENST00000577309 3703 ntBASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LYSMD3Q7Z3D4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 AC005237.2-201ENST00000434368 219 ntBASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 AC093520.2-201ENST00000561830 333 ntBASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 AP000842.3-202ENST00000569238 1080 ntBASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 REXO1L8P-201ENST00000604378 1897 ntBASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 UXT-AS1-201ENST00000590504 1525 ntBASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LYSMD3Q7Z3D4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms