Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 AC067852.2-201ENST00000590513 2313 ntBASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 UPF3AP2-201ENST00000457924 1132 ntBASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 HCG18-245ENST00000602550 559 ntTSL 4 BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 AC244452.3-201ENST00000636814 210 ntBASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTF1AQ7RTS3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 AC006001.1-201ENST00000325130 474 ntBASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 LDHBP1-201ENST00000455730 1119 ntBASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 RPSAP36-202ENST00000494591 1261 ntBASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 AL603756.1-201ENST00000606511 2163 ntBASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 KRT8P19-201ENST00000551916 1455 ntBASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 AC138028.6-201ENST00000616106 1482 ntBASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTF1AQ7RTS3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 NUS1P3-201ENST00000423502 862 ntBASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 AC025279.2-201ENST00000569730 653 ntBASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 SPCS2P2-201ENST00000603270 608 ntBASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTF1AQ7RTS3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 IMP3P2-201ENST00000489760 475 ntBASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 SCARNA20.5-201ENST00000516991 142 ntBASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 AC104982.3-201ENST00000581995 514 ntBASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 AC128714.1-201ENST00000637035 887 ntBASIC20.6■□□□□ 0.89
PTF1AQ7RTS3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms