Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 AC097376.2-205ENST00000610159 5334 ntBASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 AC211486.1-202ENST00000416371 468 ntBASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 AC211476.1-201ENST00000503899 468 ntBASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 AC068137.2-201ENST00000605408 478 ntBASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 AL691403.2-201ENST00000618460 490 ntBASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 AL353732.1-201ENST00000569618 1459 ntBASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHMP1BQ7LBR1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 AC012569.1-201ENST00000591191 1524 ntBASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 LINC02012-201ENST00000608206 1725 ntBASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 RPS8P6-201ENST00000426177 609 ntBASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 AC112191.1-201ENST00000523689 701 ntBASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 MIR4515-201ENST00000584082 81 ntBASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 ACTL9-202ENST00000612068 1252 ntBASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.17■□□□□ 0.02
CHMP1BQ7LBR1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 TOP3BP1-201ENST00000420768 1380 ntBASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 HCG4-201ENST00000418983 998 ntBASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 HTR5BP-201ENST00000430851 1154 ntBASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 FAM58CP-201ENST00000435741 640 ntBASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 MKNK2P1-201ENST00000437526 628 ntBASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 CEND1P1-201ENST00000451006 455 ntBASIC15.16■□□□□ 0.02
CHMP1BQ7LBR1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms