Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TTC39BQ5VTQ0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 AL627223.1-201ENST00000416693 442 ntBASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.05■□□□□ 0.32
TTC39BQ5VTQ0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 AC005237.2-201ENST00000434368 219 ntBASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 AC009093.7-201ENST00000623853 1223 ntBASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 AC084121.4-201ENST00000641598 221 ntBASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 AF228730.8-201ENST00000642140 221 ntBASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TTC39BQ5VTQ0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 GPAA1P2-202ENST00000606848 1787 ntBASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 ME2P1-201ENST00000426028 1970 ntBASIC17.03■□□□□ 0.32
TTC39BQ5VTQ0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms