Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 IGHV3-22-201ENST00000520721 359 ntBASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 PI4KAP1-204ENST00000612579 1703 ntBASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ATPAF1Q5TC12 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 AC010491.1-201ENST00000563101 2797 ntBASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 HLA-J-202ENST00000469281 1241 ntBASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 AC092910.1-201ENST00000482027 1129 ntBASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 AC117500.6-201ENST00000624871 588 ntBASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.25□□□□□ -0.13
ATPAF1Q5TC12 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.24□□□□□ -0.13
ATPAF1Q5TC12 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.24□□□□□ -0.13
ATPAF1Q5TC12 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATPAF1Q5TC12 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATPAF1Q5TC12 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATPAF1Q5TC12 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms