Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDH17Q12864 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH17Q12864 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDH17Q12864 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDH17Q12864 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDH17Q12864 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDH17Q12864 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.53■□□□□ 0.24
CDH17Q12864 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
CDH17Q12864 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH17Q12864 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH17Q12864 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH17Q12864 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH17Q12864 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH17Q12864 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH17Q12864 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH17Q12864 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CDH17Q12864 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH17Q12864 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH17Q12864 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CDH17Q12864 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH17Q12864 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CDH17Q12864 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CDH17Q12864 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH17Q12864 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CDH17Q12864 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH17Q12864 AC026396.1-201ENST00000419388 421 ntBASIC16.52■□□□□ 0.24
CDH17Q12864 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH17Q12864 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH17Q12864 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH17Q12864 AP002472.1-201ENST00000577490 586 ntBASIC16.52■□□□□ 0.24
CDH17Q12864 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH17Q12864 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH17Q12864 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CDH17Q12864 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH17Q12864 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDH17Q12864 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDH17Q12864 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH17Q12864 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH17Q12864 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CDH17Q12864 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDH17Q12864 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.52■□□□□ 0.23
CDH17Q12864 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH17Q12864 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CDH17Q12864 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDH17Q12864 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDH17Q12864 AC069224.1-201ENST00000566372 1715 ntBASIC16.51■□□□□ 0.23
CDH17Q12864 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CDH17Q12864 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH17Q12864 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDH17Q12864 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH17Q12864 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.51■□□□□ 0.23
CDH17Q12864 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CDH17Q12864 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.51■□□□□ 0.23
CDH17Q12864 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH17Q12864 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDH17Q12864 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDH17Q12864 AL365330.1-201ENST00000607459 531 ntBASIC16.51■□□□□ 0.23
CDH17Q12864 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH17Q12864 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH17Q12864 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDH17Q12864 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH17Q12864 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH17Q12864 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH17Q12864 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH17Q12864 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH17Q12864 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH17Q12864 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
CDH17Q12864 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH17Q12864 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH17Q12864 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH17Q12864 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDH17Q12864 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH17Q12864 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms