Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB1AP62820 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB1AP62820 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB1AP62820 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB1AP62820 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB1AP62820 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB1AP62820 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB1AP62820 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB1AP62820 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB1AP62820 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB1AP62820 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB1AP62820 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.42□□□□□ -0.1
RAB1AP62820 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB1AP62820 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB1AP62820 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB1AP62820 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB1AP62820 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.41□□□□□ -0.1
RAB1AP62820 YBX1P5-201ENST00000509441 847 ntBASIC14.41□□□□□ -0.1
RAB1AP62820 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
RAB1AP62820 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.41□□□□□ -0.1
RAB1AP62820 AL135744.1-201ENST00000565098 629 ntBASIC14.41□□□□□ -0.1
RAB1AP62820 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.41□□□□□ -0.1
RAB1AP62820 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB1AP62820 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
RAB1AP62820 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RAB1AP62820 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
RAB1AP62820 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RAB1AP62820 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB1AP62820 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB1AP62820 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB1AP62820 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB1AP62820 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 AC005052.1-201ENST00000625181 2492 ntBASIC14.4□□□□□ -0.1
RAB1AP62820 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 ME2P1-201ENST00000426028 1970 ntBASIC14.4□□□□□ -0.1
RAB1AP62820 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB1AP62820 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB1AP62820 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB1AP62820 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RAB1AP62820 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB1AP62820 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
RAB1AP62820 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB1AP62820 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
RAB1AP62820 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB1AP62820 AC211486.1-202ENST00000416371 468 ntBASIC14.4□□□□□ -0.1
RAB1AP62820 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB1AP62820 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
RAB1AP62820 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB1AP62820 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB1AP62820 RN7SL589P-201ENST00000481268 310 ntBASIC14.4□□□□□ -0.1
RAB1AP62820 AC211476.1-201ENST00000503899 468 ntBASIC14.4□□□□□ -0.1
RAB1AP62820 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
RAB1AP62820 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB1AP62820 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RAB1AP62820 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB1AP62820 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms