Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-5P52952 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.93□□□□□ -0.18
NKX2-5P52952 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.93□□□□□ -0.18
NKX2-5P52952 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX2-5P52952 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
NKX2-5P52952 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-5P52952 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-5P52952 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.93□□□□□ -0.18
NKX2-5P52952 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-5P52952 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-5P52952 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
NKX2-5P52952 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NKX2-5P52952 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX2-5P52952 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 NUTM2HP-201ENST00000442076 2498 ntBASIC13.92□□□□□ -0.18
NKX2-5P52952 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX2-5P52952 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
NKX2-5P52952 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NKX2-5P52952 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
NKX2-5P52952 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NKX2-5P52952 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.92□□□□□ -0.18
NKX2-5P52952 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX2-5P52952 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NKX2-5P52952 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
NKX2-5P52952 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.92□□□□□ -0.18
NKX2-5P52952 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.92□□□□□ -0.18
NKX2-5P52952 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 ZNRF2P3-201ENST00000424200 374 ntBASIC13.92□□□□□ -0.18
NKX2-5P52952 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX2-5P52952 AC008040.2-201ENST00000461049 708 ntBASIC13.92□□□□□ -0.18
NKX2-5P52952 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.92□□□□□ -0.18
NKX2-5P52952 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX2-5P52952 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.92□□□□□ -0.18
NKX2-5P52952 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX2-5P52952 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX2-5P52952 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.92□□□□□ -0.18
NKX2-5P52952 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NKX2-5P52952 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.92□□□□□ -0.18
NKX2-5P52952 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.92□□□□□ -0.18
NKX2-5P52952 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.92□□□□□ -0.18
NKX2-5P52952 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.92□□□□□ -0.18
NKX2-5P52952 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NKX2-5P52952 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
NKX2-5P52952 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
NKX2-5P52952 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NKX2-5P52952 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.92□□□□□ -0.18
NKX2-5P52952 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NKX2-5P52952 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-5P52952 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-5P52952 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-5P52952 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-5P52952 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-5P52952 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
NKX2-5P52952 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-5P52952 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-5P52952 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
NKX2-5P52952 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.91□□□□□ -0.18
NKX2-5P52952 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-5P52952 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-5P52952 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-5P52952 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-5P52952 AC137761.2-201ENST00000561729 223 ntBASIC13.91□□□□□ -0.18
NKX2-5P52952 AC145350.3-201ENST00000569033 163 ntBASIC13.91□□□□□ -0.18
NKX2-5P52952 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NKX2-5P52952 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-5P52952 AL445675.2-201ENST00000620291 557 ntBASIC13.91□□□□□ -0.18
NKX2-5P52952 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-5P52952 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-5P52952 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-5P52952 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.91□□□□□ -0.18
NKX2-5P52952 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-5P52952 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-5P52952 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NKX2-5P52952 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-5P52952 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.91□□□□□ -0.18
NKX2-5P52952 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.91□□□□□ -0.18
NKX2-5P52952 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NKX2-5P52952 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NKX2-5P52952 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX2-5P52952 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 AC105206.1-202ENST00000314927 2368 ntBASIC13.9□□□□□ -0.18
NKX2-5P52952 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.9□□□□□ -0.18
NKX2-5P52952 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NKX2-5P52952 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.9□□□□□ -0.18
NKX2-5P52952 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms