Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGA2P52926 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HMGA2P52926 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HMGA2P52926 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGA2P52926 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HMGA2P52926 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGA2P52926 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGA2P52926 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGA2P52926 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGA2P52926 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGA2P52926 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGA2P52926 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGA2P52926 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGA2P52926 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGA2P52926 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
HMGA2P52926 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGA2P52926 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGA2P52926 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HMGA2P52926 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGA2P52926 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
HMGA2P52926 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGA2P52926 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGA2P52926 AL645728.2-201ENST00000641974 660 ntBASIC14.91□□□□□ -0.02
HMGA2P52926 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGA2P52926 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGA2P52926 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HMGA2P52926 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGA2P52926 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGA2P52926 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGA2P52926 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGA2P52926 AC105250.1-201ENST00000509378 2057 ntBASIC14.91□□□□□ -0.02
HMGA2P52926 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGA2P52926 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HMGA2P52926 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGA2P52926 AC087481.3-201ENST00000602886 1894 ntBASIC14.91□□□□□ -0.02
HMGA2P52926 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGA2P52926 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGA2P52926 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HMGA2P52926 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGA2P52926 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
HMGA2P52926 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGA2P52926 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HMGA2P52926 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
HMGA2P52926 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGA2P52926 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGA2P52926 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.9□□□□□ -0.02
HMGA2P52926 RPS2P1-201ENST00000434010 821 ntBASIC14.9□□□□□ -0.02
HMGA2P52926 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.9□□□□□ -0.02
HMGA2P52926 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGA2P52926 AL031432.2-201ENST00000566714 459 ntBASIC14.9□□□□□ -0.02
HMGA2P52926 AL928711.1-201ENST00000570165 459 ntBASIC14.9□□□□□ -0.02
HMGA2P52926 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGA2P52926 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGA2P52926 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
HMGA2P52926 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
HMGA2P52926 AC093458.2-201ENST00000623150 629 ntBASIC14.9□□□□□ -0.02
HMGA2P52926 AC008735.5-201ENST00000623544 497 ntBASIC14.9□□□□□ -0.02
HMGA2P52926 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGA2P52926 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGA2P52926 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 FAM45BP-202ENST00000592932 1624 ntBASIC14.9□□□□□ -0.02
HMGA2P52926 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HMGA2P52926 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGA2P52926 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HMGA2P52926 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HMGA2P52926 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGA2P52926 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
HMGA2P52926 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGA2P52926 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.9□□□□□ -0.02
HMGA2P52926 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGA2P52926 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
HMGA2P52926 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HMGA2P52926 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGA2P52926 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HMGA2P52926 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGA2P52926 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HMGA2P52926 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.89□□□□□ -0.03
HMGA2P52926 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGA2P52926 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGA2P52926 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGA2P52926 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGA2P52926 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms