Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.97■□□□□ 0.47
CDK7P50613 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDK7P50613 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CDK7P50613 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDK7P50613 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK7P50613 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK7P50613 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK7P50613 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CDK7P50613 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.96■□□□□ 0.47
CDK7P50613 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDK7P50613 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.96■□□□□ 0.47
CDK7P50613 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.96■□□□□ 0.47
CDK7P50613 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK7P50613 PCDHB17P-201ENST00000539533 2393 ntBASIC17.96■□□□□ 0.47
CDK7P50613 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.96■□□□□ 0.47
CDK7P50613 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDK7P50613 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK7P50613 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK7P50613 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDK7P50613 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK7P50613 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CDK7P50613 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CDK7P50613 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CDK7P50613 CROCCP4-201ENST00000457096 498 ntBASIC17.96■□□□□ 0.47
CDK7P50613 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.96■□□□□ 0.47
CDK7P50613 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDK7P50613 RARRES2P5-201ENST00000564013 466 ntBASIC17.96■□□□□ 0.47
CDK7P50613 AC015936.2-201ENST00000593177 259 ntBASIC17.96■□□□□ 0.47
CDK7P50613 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.96■□□□□ 0.47
CDK7P50613 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.96■□□□□ 0.47
CDK7P50613 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDK7P50613 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.96■□□□□ 0.47
CDK7P50613 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDK7P50613 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.96■□□□□ 0.47
CDK7P50613 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDK7P50613 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDK7P50613 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDK7P50613 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.95■□□□□ 0.46
CDK7P50613 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDK7P50613 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDK7P50613 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CDK7P50613 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.95■□□□□ 0.46
CDK7P50613 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDK7P50613 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDK7P50613 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.95■□□□□ 0.46
CDK7P50613 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.95■□□□□ 0.46
CDK7P50613 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDK7P50613 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.95■□□□□ 0.46
CDK7P50613 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
CDK7P50613 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.95■□□□□ 0.46
CDK7P50613 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 MIR4525-201ENST00000580000 75 ntBASIC17.95■□□□□ 0.46
CDK7P50613 AC025048.3-201ENST00000590609 569 ntBASIC17.95■□□□□ 0.46
CDK7P50613 AC074044.1-201ENST00000609673 707 ntBASIC17.95■□□□□ 0.46
CDK7P50613 AC005702.4-201ENST00000618393 416 ntBASIC17.95■□□□□ 0.46
CDK7P50613 RPSAP52-203ENST00000622976 1023 ntBASIC17.95■□□□□ 0.46
CDK7P50613 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.95■□□□□ 0.46
CDK7P50613 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDK7P50613 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDK7P50613 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.95■□□□□ 0.46
CDK7P50613 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDK7P50613 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.95■□□□□ 0.46
CDK7P50613 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK7P50613 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.94■□□□□ 0.46
CDK7P50613 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK7P50613 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK7P50613 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK7P50613 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDK7P50613 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CDK7P50613 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK7P50613 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK7P50613 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK7P50613 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK7P50613 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK7P50613 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.94■□□□□ 0.46
CDK7P50613 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK7P50613 BOLA2P3-201ENST00000404566 256 ntBASIC17.94■□□□□ 0.46
CDK7P50613 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK7P50613 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.94■□□□□ 0.46
CDK7P50613 HIST3H2BA-201ENST00000436555 524 ntBASIC17.94■□□□□ 0.46
CDK7P50613 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.94■□□□□ 0.46
CDK7P50613 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms