Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CEACAM3P40198 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.38□□□□□ -0.27
CEACAM3P40198 U82695.1-201ENST00000635752 1889 ntBASIC13.38□□□□□ -0.27
CEACAM3P40198 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CEACAM3P40198 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.38□□□□□ -0.27
CEACAM3P40198 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CEACAM3P40198 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
CEACAM3P40198 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CEACAM3P40198 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.37□□□□□ -0.27
CEACAM3P40198 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.37□□□□□ -0.27
CEACAM3P40198 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
CEACAM3P40198 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.37□□□□□ -0.27
CEACAM3P40198 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CEACAM3P40198 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.37□□□□□ -0.27
CEACAM3P40198 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CEACAM3P40198 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.37□□□□□ -0.27
CEACAM3P40198 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CEACAM3P40198 PRYP6-201ENST00000514804 343 ntBASIC13.37□□□□□ -0.27
CEACAM3P40198 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.37□□□□□ -0.27
CEACAM3P40198 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.37□□□□□ -0.27
CEACAM3P40198 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CEACAM3P40198 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CEACAM3P40198 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.37□□□□□ -0.27
CEACAM3P40198 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.37□□□□□ -0.27
CEACAM3P40198 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CEACAM3P40198 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
CEACAM3P40198 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.37□□□□□ -0.27
CEACAM3P40198 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CEACAM3P40198 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.37□□□□□ -0.27
CEACAM3P40198 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CEACAM3P40198 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CEACAM3P40198 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.36□□□□□ -0.27
CEACAM3P40198 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CEACAM3P40198 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CEACAM3P40198 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CEACAM3P40198 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CEACAM3P40198 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.36□□□□□ -0.27
CEACAM3P40198 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
CEACAM3P40198 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.36□□□□□ -0.27
CEACAM3P40198 RPSAP43-201ENST00000402237 625 ntBASIC13.36□□□□□ -0.27
CEACAM3P40198 MIR1233-2-201ENST00000408138 82 ntBASIC13.36□□□□□ -0.27
CEACAM3P40198 MIR1233-1-201ENST00000408722 82 ntBASIC13.36□□□□□ -0.27
CEACAM3P40198 AC211486.1-202ENST00000416371 468 ntBASIC13.36□□□□□ -0.27
CEACAM3P40198 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.36□□□□□ -0.27
CEACAM3P40198 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.36□□□□□ -0.27
CEACAM3P40198 TIMM8BP1-201ENST00000452384 211 ntBASIC13.36□□□□□ -0.27
CEACAM3P40198 ALG1L5P-201ENST00000482043 771 ntBASIC13.36□□□□□ -0.27
CEACAM3P40198 AC112482.1-201ENST00000492080 688 ntBASIC13.36□□□□□ -0.27
CEACAM3P40198 AC211476.1-201ENST00000503899 468 ntBASIC13.36□□□□□ -0.27
CEACAM3P40198 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
CEACAM3P40198 YBX1P5-201ENST00000509441 847 ntBASIC13.36□□□□□ -0.27
CEACAM3P40198 KRT8P23-201ENST00000560090 1207 ntBASIC13.36□□□□□ -0.27
CEACAM3P40198 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
CEACAM3P40198 MIR4469-201ENST00000583919 79 ntBASIC13.36□□□□□ -0.27
CEACAM3P40198 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.36□□□□□ -0.27
CEACAM3P40198 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CEACAM3P40198 ME2P1-201ENST00000426028 1970 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms