Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3BP20337 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3BP20337 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.39□□□□□ -0.11
RAB3BP20337 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3BP20337 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3BP20337 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB3BP20337 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB3BP20337 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RAB3BP20337 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
RAB3BP20337 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB3BP20337 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
RAB3BP20337 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 AC092919.2-201ENST00000623631 1645 ntBASIC14.38□□□□□ -0.11
RAB3BP20337 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB3BP20337 MINOS1P3-201ENST00000457048 203 ntBASIC14.38□□□□□ -0.11
RAB3BP20337 AL671277.2-201ENST00000458060 996 ntBASIC14.38□□□□□ -0.11
RAB3BP20337 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB3BP20337 AC096582.2-201ENST00000510860 516 ntBASIC14.38□□□□□ -0.11
RAB3BP20337 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.38□□□□□ -0.11
RAB3BP20337 AC010331.1-201ENST00000611423 582 ntBASIC14.38□□□□□ -0.11
RAB3BP20337 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RAB3BP20337 AC073592.4-201ENST00000623827 446 ntBASIC14.38□□□□□ -0.11
RAB3BP20337 PGM5P2-202ENST00000637225 1043 ntBASIC14.38□□□□□ -0.11
RAB3BP20337 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB3BP20337 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB3BP20337 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
RAB3BP20337 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RAB3BP20337 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB3BP20337 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB3BP20337 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB3BP20337 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAB3BP20337 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB3BP20337 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB3BP20337 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
RAB3BP20337 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB3BP20337 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB3BP20337 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB3BP20337 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB3BP20337 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 RCN1P2-201ENST00000398357 915 ntBASIC14.37□□□□□ -0.11
RAB3BP20337 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAB3BP20337 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB3BP20337 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB3BP20337 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
RAB3BP20337 AC091167.2-201ENST00000579581 588 ntBASIC14.37□□□□□ -0.11
RAB3BP20337 AC020765.3-201ENST00000613051 740 ntBASIC14.37□□□□□ -0.11
RAB3BP20337 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB3BP20337 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
RAB3BP20337 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAB3BP20337 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB3BP20337 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB3BP20337 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB3BP20337 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 AL109954.1-202ENST00000564051 2148 ntBASIC14.36□□□□□ -0.11
RAB3BP20337 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RAB3BP20337 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
RAB3BP20337 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB3BP20337 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms