Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ERCC2P18074 MIR346-201ENST00000362234 95 ntBASIC16.82■□□□□ 0.28
ERCC2P18074 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.82■□□□□ 0.28
ERCC2P18074 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.82■□□□□ 0.28
ERCC2P18074 AC142381.1-201ENST00000426099 345 ntBASIC16.82■□□□□ 0.28
ERCC2P18074 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.82■□□□□ 0.28
ERCC2P18074 AL592309.1-201ENST00000443127 649 ntBASIC16.82■□□□□ 0.28
ERCC2P18074 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ERCC2P18074 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.82■□□□□ 0.28
ERCC2P18074 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.82■□□□□ 0.28
ERCC2P18074 AP000842.3-202ENST00000569238 1080 ntBASIC16.82■□□□□ 0.28
ERCC2P18074 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.82■□□□□ 0.28
ERCC2P18074 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.82■□□□□ 0.28
ERCC2P18074 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.82■□□□□ 0.28
ERCC2P18074 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.82■□□□□ 0.28
ERCC2P18074 AC022145.2-201ENST00000598203 171 ntBASIC16.82■□□□□ 0.28
ERCC2P18074 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.82■□□□□ 0.28
ERCC2P18074 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ERCC2P18074 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
ERCC2P18074 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
ERCC2P18074 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ERCC2P18074 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
ERCC2P18074 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ERCC2P18074 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
ERCC2P18074 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
ERCC2P18074 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC2P18074 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.81■□□□□ 0.28
ERCC2P18074 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.81■□□□□ 0.28
ERCC2P18074 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.81■□□□□ 0.28
ERCC2P18074 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.81■□□□□ 0.28
ERCC2P18074 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
ERCC2P18074 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.81■□□□□ 0.28
ERCC2P18074 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.81■□□□□ 0.28
ERCC2P18074 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.81■□□□□ 0.28
ERCC2P18074 AC069335.1-201ENST00000489972 472 ntBASIC16.81■□□□□ 0.28
ERCC2P18074 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 AC098859.1-201ENST00000502915 1238 ntBASIC16.81■□□□□ 0.28
ERCC2P18074 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.81■□□□□ 0.28
ERCC2P18074 IGHV3-62-201ENST00000520057 340 ntBASIC16.81■□□□□ 0.28
ERCC2P18074 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.81■□□□□ 0.28
ERCC2P18074 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.81■□□□□ 0.28
ERCC2P18074 KRT8P23-201ENST00000560090 1207 ntBASIC16.81■□□□□ 0.28
ERCC2P18074 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.81■□□□□ 0.28
ERCC2P18074 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.81■□□□□ 0.28
ERCC2P18074 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.81■□□□□ 0.28
ERCC2P18074 SPTSSB-204ENST00000617024 1292 ntBASIC16.81■□□□□ 0.28
ERCC2P18074 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ERCC2P18074 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ERCC2P18074 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.81■□□□□ 0.28
ERCC2P18074 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.81■□□□□ 0.28
ERCC2P18074 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.81■□□□□ 0.28
ERCC2P18074 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC2P18074 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.8■□□□□ 0.28
ERCC2P18074 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.8■□□□□ 0.28
ERCC2P18074 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC2P18074 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC2P18074 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ERCC2P18074 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC2P18074 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC2P18074 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC2P18074 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ERCC2P18074 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC2P18074 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC2P18074 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ERCC2P18074 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC2P18074 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC2P18074 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.8■□□□□ 0.28
ERCC2P18074 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.8■□□□□ 0.28
ERCC2P18074 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC2P18074 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.8■□□□□ 0.28
ERCC2P18074 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ERCC2P18074 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.8■□□□□ 0.28
ERCC2P18074 AL513210.1-201ENST00000629608 234 ntBASIC16.8■□□□□ 0.28
ERCC2P18074 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC2P18074 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.8■□□□□ 0.28
ERCC2P18074 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ERCC2P18074 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.8■□□□□ 0.28
ERCC2P18074 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms