Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
RAB40ALP0C0E4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 UBALD1-205ENST00000590891 2641 ntBASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 MTND6P24-201ENST00000440466 518 ntBASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 SERBP1P5-201ENST00000510079 1181 ntBASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 AC027307.3-201ENST00000594262 1100 ntBASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 TEX28P1-201ENST00000613479 1221 ntBASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 TEX28P2-201ENST00000617764 1221 ntBASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 AC046158.3-201ENST00000624947 2558 ntBASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 AL512652.2-201ENST00000625156 1716 ntBASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 AL139384.1-201ENST00000612143 3047 ntBASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40ALP0C0E4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 PIN1P1-201ENST00000412108 996 ntBASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms