Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLTAP09496 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.92■□□□□ 0.46
CLTAP09496 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.91■□□□□ 0.46
CLTAP09496 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLTAP09496 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.91■□□□□ 0.46
CLTAP09496 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.91■□□□□ 0.46
CLTAP09496 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLTAP09496 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLTAP09496 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.91■□□□□ 0.46
CLTAP09496 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.91■□□□□ 0.46
CLTAP09496 AC142381.1-201ENST00000426099 345 ntBASIC17.91■□□□□ 0.46
CLTAP09496 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.91■□□□□ 0.46
CLTAP09496 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.91■□□□□ 0.46
CLTAP09496 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.91■□□□□ 0.46
CLTAP09496 LINC00628-201ENST00000628516 1289 ntBASIC17.91■□□□□ 0.46
CLTAP09496 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.91■□□□□ 0.46
CLTAP09496 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CLTAP09496 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLTAP09496 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CLTAP09496 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLTAP09496 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLTAP09496 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CLTAP09496 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.91■□□□□ 0.46
CLTAP09496 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLTAP09496 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 PCGF3-213ENST00000620529 1899 ntBASIC17.9■□□□□ 0.46
CLTAP09496 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
CLTAP09496 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CLTAP09496 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLTAP09496 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.9■□□□□ 0.46
CLTAP09496 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.9■□□□□ 0.46
CLTAP09496 GPS2P2-201ENST00000430745 888 ntBASIC17.9■□□□□ 0.46
CLTAP09496 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.9■□□□□ 0.46
CLTAP09496 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.9■□□□□ 0.46
CLTAP09496 AC109322.1-201ENST00000524499 1264 ntBASIC17.9■□□□□ 0.46
CLTAP09496 AC004449.1-201ENST00000564240 433 ntBASIC17.9■□□□□ 0.46
CLTAP09496 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.9■□□□□ 0.46
CLTAP09496 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLTAP09496 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLTAP09496 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CLTAP09496 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLTAP09496 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.89■□□□□ 0.46
CLTAP09496 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CLTAP09496 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLTAP09496 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CLTAP09496 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
CLTAP09496 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.89■□□□□ 0.45
CLTAP09496 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLTAP09496 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.89■□□□□ 0.45
CLTAP09496 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CLTAP09496 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.89■□□□□ 0.45
CLTAP09496 RBPMS2P1-201ENST00000437762 623 ntBASIC17.89■□□□□ 0.45
CLTAP09496 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.89■□□□□ 0.45
CLTAP09496 AC025678.2-201ENST00000562061 970 ntBASIC17.89■□□□□ 0.45
CLTAP09496 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.89■□□□□ 0.45
CLTAP09496 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.89■□□□□ 0.45
CLTAP09496 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms