Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.51■□□□□ 0.23
VIMP08670 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VIMP08670 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VIMP08670 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VIMP08670 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.51■□□□□ 0.23
VIMP08670 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.51■□□□□ 0.23
VIMP08670 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VIMP08670 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VIMP08670 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VIMP08670 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VIMP08670 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VIMP08670 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.51■□□□□ 0.23
VIMP08670 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VIMP08670 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VIMP08670 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VIMP08670 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VIMP08670 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VIMP08670 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.51■□□□□ 0.23
VIMP08670 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.51■□□□□ 0.23
VIMP08670 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VIMP08670 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.5■□□□□ 0.23
VIMP08670 AC020658.6-201ENST00000623564 1870 ntBASIC16.5■□□□□ 0.23
VIMP08670 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.5■□□□□ 0.23
VIMP08670 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VIMP08670 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VIMP08670 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.5■□□□□ 0.23
VIMP08670 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.5■□□□□ 0.23
VIMP08670 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.5■□□□□ 0.23
VIMP08670 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
VIMP08670 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VIMP08670 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.5■□□□□ 0.23
VIMP08670 HBZP1-201ENST00000354915 429 ntBASIC16.5■□□□□ 0.23
VIMP08670 STARP1-201ENST00000397973 869 ntBASIC16.5■□□□□ 0.23
VIMP08670 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
VIMP08670 LIN28AP1-201ENST00000429574 405 ntBASIC16.5■□□□□ 0.23
VIMP08670 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.5■□□□□ 0.23
VIMP08670 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.5■□□□□ 0.23
VIMP08670 AL441883.1-201ENST00000566170 1045 ntBASIC16.5■□□□□ 0.23
VIMP08670 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 AC005336.2-201ENST00000593183 939 ntBASIC16.5■□□□□ 0.23
VIMP08670 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.5■□□□□ 0.23
VIMP08670 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 LINC01144-201ENST00000626198 1710 ntBASIC16.5■□□□□ 0.23
VIMP08670 TMBIM7P-203ENST00000641617 1718 ntBASIC16.5■□□□□ 0.23
VIMP08670 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.5■□□□□ 0.23
VIMP08670 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.5■□□□□ 0.23
VIMP08670 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VIMP08670 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VIMP08670 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
VIMP08670 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.49■□□□□ 0.23
VIMP08670 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.49■□□□□ 0.23
VIMP08670 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
VIMP08670 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 MIR648-201ENST00000385046 94 ntBASIC16.49■□□□□ 0.23
VIMP08670 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.49■□□□□ 0.23
VIMP08670 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.49■□□□□ 0.23
VIMP08670 GUSBP12-201ENST00000513727 720 ntBASIC16.49■□□□□ 0.23
VIMP08670 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
VIMP08670 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
VIMP08670 RNF126P1-202ENST00000569893 925 ntBASIC16.49■□□□□ 0.23
VIMP08670 AD001527.2-201ENST00000622994 785 ntBASIC16.49■□□□□ 0.23
VIMP08670 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VIMP08670 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VIMP08670 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VIMP08670 LINC01568-207ENST00000641790 1380 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms