Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.41■□□□□ 0.22
MMP2P08253 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.41■□□□□ 0.22
MMP2P08253 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP2P08253 AC023141.5-201ENST00000458585 616 ntBASIC16.41■□□□□ 0.22
MMP2P08253 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.41■□□□□ 0.22
MMP2P08253 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.41■□□□□ 0.22
MMP2P08253 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.41■□□□□ 0.22
MMP2P08253 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
MMP2P08253 AL691403.2-201ENST00000618460 490 ntBASIC16.41■□□□□ 0.22
MMP2P08253 AC139530.3-201ENST00000620344 690 ntBASIC16.41■□□□□ 0.22
MMP2P08253 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.41■□□□□ 0.22
MMP2P08253 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MMP2P08253 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP2P08253 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.41■□□□□ 0.22
MMP2P08253 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
MMP2P08253 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
MMP2P08253 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP2P08253 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 LINC02447-202ENST00000501888 2146 ntBASIC16.4■□□□□ 0.22
MMP2P08253 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP2P08253 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.4■□□□□ 0.22
MMP2P08253 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP2P08253 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP2P08253 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MMP2P08253 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
MMP2P08253 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MMP2P08253 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MMP2P08253 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
MMP2P08253 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.4■□□□□ 0.22
MMP2P08253 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP2P08253 RPS8P6-201ENST00000426177 609 ntBASIC16.4■□□□□ 0.22
MMP2P08253 SPDYE14P-201ENST00000442619 822 ntBASIC16.4■□□□□ 0.22
MMP2P08253 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.4■□□□□ 0.22
MMP2P08253 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.4■□□□□ 0.22
MMP2P08253 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP2P08253 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP2P08253 AC024267.1-201ENST00000582320 895 ntBASIC16.4■□□□□ 0.22
MMP2P08253 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.4■□□□□ 0.22
MMP2P08253 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MMP2P08253 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.4■□□□□ 0.22
MMP2P08253 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP2P08253 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
MMP2P08253 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP2P08253 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP2P08253 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
MMP2P08253 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP2P08253 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP2P08253 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MMP2P08253 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
MMP2P08253 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.39■□□□□ 0.21
MMP2P08253 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MMP2P08253 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
MMP2P08253 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MMP2P08253 HAUS4P1-201ENST00000406739 1145 ntBASIC16.39■□□□□ 0.21
MMP2P08253 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 RBPMS2P1-201ENST00000437762 623 ntBASIC16.39■□□□□ 0.21
MMP2P08253 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.39■□□□□ 0.21
MMP2P08253 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP2P08253 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
MMP2P08253 AC026150.2-201ENST00000564693 1156 ntBASIC16.39■□□□□ 0.21
MMP2P08253 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MMP2P08253 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MMP2P08253 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP2P08253 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP2P08253 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP2P08253 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms