Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
APOA4P06727 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.43■□□□□ 0.22
APOA4P06727 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.43■□□□□ 0.22
APOA4P06727 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.43■□□□□ 0.22
APOA4P06727 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.43■□□□□ 0.22
APOA4P06727 AC020765.3-201ENST00000613051 740 ntBASIC16.43■□□□□ 0.22
APOA4P06727 AC004877.2-201ENST00000623941 599 ntBASIC16.43■□□□□ 0.22
APOA4P06727 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.43■□□□□ 0.22
APOA4P06727 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
APOA4P06727 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.43■□□□□ 0.22
APOA4P06727 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.43■□□□□ 0.22
APOA4P06727 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
APOA4P06727 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
APOA4P06727 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
APOA4P06727 PAUPAR-201ENST00000630360 2965 ntBASIC16.43■□□□□ 0.22
APOA4P06727 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
APOA4P06727 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
APOA4P06727 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
APOA4P06727 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
APOA4P06727 AC132872.4-202ENST00000622924 2756 ntBASIC16.43■□□□□ 0.22
APOA4P06727 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
APOA4P06727 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.43■□□□□ 0.22
APOA4P06727 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOA4P06727 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
APOA4P06727 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOA4P06727 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.42■□□□□ 0.22
APOA4P06727 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOA4P06727 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
APOA4P06727 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOA4P06727 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.42■□□□□ 0.22
APOA4P06727 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
APOA4P06727 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.42■□□□□ 0.22
APOA4P06727 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOA4P06727 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
APOA4P06727 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOA4P06727 HMGA1P7-201ENST00000406908 502 ntBASIC16.42■□□□□ 0.22
APOA4P06727 KRT18P2-201ENST00000447938 1258 ntBASIC16.42■□□□□ 0.22
APOA4P06727 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.42■□□□□ 0.22
APOA4P06727 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
APOA4P06727 KRT18P58-201ENST00000527480 1120 ntBASIC16.42■□□□□ 0.22
APOA4P06727 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.42■□□□□ 0.22
APOA4P06727 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.42■□□□□ 0.22
APOA4P06727 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.42■□□□□ 0.22
APOA4P06727 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
APOA4P06727 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
APOA4P06727 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOA4P06727 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.42■□□□□ 0.22
APOA4P06727 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.42■□□□□ 0.22
APOA4P06727 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOA4P06727 AC025580.3-201ENST00000617932 1424 ntBASIC16.42■□□□□ 0.22
APOA4P06727 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOA4P06727 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
APOA4P06727 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
APOA4P06727 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
APOA4P06727 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
APOA4P06727 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.41■□□□□ 0.22
APOA4P06727 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
APOA4P06727 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.41■□□□□ 0.22
APOA4P06727 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.41■□□□□ 0.22
APOA4P06727 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
APOA4P06727 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
APOA4P06727 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.41■□□□□ 0.22
APOA4P06727 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.41■□□□□ 0.22
APOA4P06727 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
APOA4P06727 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.41■□□□□ 0.22
APOA4P06727 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.41■□□□□ 0.22
APOA4P06727 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
APOA4P06727 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
APOA4P06727 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.41■□□□□ 0.22
APOA4P06727 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
APOA4P06727 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.41■□□□□ 0.22
APOA4P06727 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.41■□□□□ 0.22
APOA4P06727 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.41■□□□□ 0.22
APOA4P06727 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
APOA4P06727 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
APOA4P06727 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
APOA4P06727 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.41■□□□□ 0.22
APOA4P06727 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
APOA4P06727 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.41■□□□□ 0.22
APOA4P06727 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.41■□□□□ 0.22
APOA4P06727 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APOA4P06727 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
APOA4P06727 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms