Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DOAP06340 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DOAP06340 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-DOAP06340 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-DOAP06340 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.16■□□□□ 0.66
HLA-DOAP06340 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-DOAP06340 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DOAP06340 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DOAP06340 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DOAP06340 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DOAP06340 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DOAP06340 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DOAP06340 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOAP06340 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOAP06340 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DOAP06340 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOAP06340 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DOAP06340 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOAP06340 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOAP06340 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOAP06340 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HLA-DOAP06340 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HLA-DOAP06340 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HLA-DOAP06340 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOAP06340 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HLA-DOAP06340 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOAP06340 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DOAP06340 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HLA-DOAP06340 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DOAP06340 RN7SL692P-201ENST00000464677 288 ntBASIC19.15■□□□□ 0.66
HLA-DOAP06340 DOC2GP-202ENST00000514950 1163 ntBASIC19.15■□□□□ 0.66
HLA-DOAP06340 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HLA-DOAP06340 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOAP06340 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DOAP06340 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.15■□□□□ 0.66
HLA-DOAP06340 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HLA-DOAP06340 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOAP06340 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HLA-DOAP06340 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOAP06340 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOAP06340 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOAP06340 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOAP06340 CYP4F24P-201ENST00000586049 1580 ntBASIC19.15■□□□□ 0.66
HLA-DOAP06340 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DOAP06340 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.14■□□□□ 0.66
HLA-DOAP06340 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DOAP06340 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HLA-DOAP06340 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DOAP06340 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 DFFBP1-201ENST00000433250 979 ntBASIC19.14■□□□□ 0.65
HLA-DOAP06340 GNAQP1-201ENST00000444815 1067 ntBASIC19.14■□□□□ 0.65
HLA-DOAP06340 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DOAP06340 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DOAP06340 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.14■□□□□ 0.65
HLA-DOAP06340 AL596325.1-201ENST00000563991 1082 ntBASIC19.14■□□□□ 0.65
HLA-DOAP06340 TP53TG3HP-202ENST00000569755 579 ntBASIC19.14■□□□□ 0.65
HLA-DOAP06340 AC140912.1-201ENST00000577171 1054 ntBASIC19.14■□□□□ 0.65
HLA-DOAP06340 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DOAP06340 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HLA-DOAP06340 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HLA-DOAP06340 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HLA-DOAP06340 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HLA-DOAP06340 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HLA-DOAP06340 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DOAP06340 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HLA-DOAP06340 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOAP06340 AL136982.4-201ENST00000437689 1740 ntBASIC19.14■□□□□ 0.65
HLA-DOAP06340 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.14■□□□□ 0.65
HLA-DOAP06340 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 SPDYE19P-201ENST00000338590 713 ntBASIC19.13■□□□□ 0.65
HLA-DOAP06340 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 AC093004.1-201ENST00000508850 424 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms