Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPNS1P04632 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPNS1P04632 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPNS1P04632 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPNS1P04632 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPNS1P04632 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.29■□□□□ 0.2
CAPNS1P04632 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CAPNS1P04632 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPNS1P04632 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.29■□□□□ 0.2
CAPNS1P04632 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CAPNS1P04632 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPNS1P04632 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CAPNS1P04632 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPNS1P04632 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPNS1P04632 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CAPNS1P04632 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPNS1P04632 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CAPNS1P04632 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.29■□□□□ 0.2
CAPNS1P04632 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPNS1P04632 BX276092.7-203ENST00000637198 1536 ntBASIC16.29■□□□□ 0.2
CAPNS1P04632 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPNS1P04632 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPNS1P04632 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CAPNS1P04632 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CAPNS1P04632 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 SPCS2P4-201ENST00000436160 681 ntBASIC16.28■□□□□ 0.2
CAPNS1P04632 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPNS1P04632 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPNS1P04632 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.28■□□□□ 0.2
CAPNS1P04632 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPNS1P04632 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.28■□□□□ 0.2
CAPNS1P04632 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPNS1P04632 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CAPNS1P04632 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPNS1P04632 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CAPNS1P04632 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPNS1P04632 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.27■□□□□ 0.2
CAPNS1P04632 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CAPNS1P04632 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CAPNS1P04632 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CAPNS1P04632 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.27■□□□□ 0.2
CAPNS1P04632 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.27■□□□□ 0.2
CAPNS1P04632 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.27■□□□□ 0.2
CAPNS1P04632 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.27■□□□□ 0.2
CAPNS1P04632 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.2
CAPNS1P04632 AKAP8P1-201ENST00000434743 1349 ntBASIC16.27■□□□□ 0.2
CAPNS1P04632 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.27■□□□□ 0.2
CAPNS1P04632 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CAPNS1P04632 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CAPNS1P04632 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CAPNS1P04632 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPNS1P04632 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPNS1P04632 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPNS1P04632 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPNS1P04632 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPNS1P04632 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CAPNS1P04632 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.27■□□□□ 0.2
CAPNS1P04632 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPNS1P04632 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPNS1P04632 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CAPNS1P04632 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.27■□□□□ 0.2
CAPNS1P04632 GPR53P-205ENST00000457298 1084 ntBASIC16.27■□□□□ 0.2
CAPNS1P04632 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.27■□□□□ 0.2
CAPNS1P04632 AC069120.2-201ENST00000524091 540 ntBASIC16.27■□□□□ 0.2
CAPNS1P04632 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.27■□□□□ 0.2
CAPNS1P04632 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.27■□□□□ 0.2
CAPNS1P04632 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms