Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.77□□□□□ -0.04
HLA-DPB1P04440 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPB1P04440 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 AL139288.1-201ENST00000623748 933 ntBASIC14.77□□□□□ -0.05
HLA-DPB1P04440 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 AL671710.1-201ENST00000610245 2349 ntBASIC14.77□□□□□ -0.05
HLA-DPB1P04440 CDC14C-201ENST00000428251 1719 ntBASIC14.77□□□□□ -0.05
HLA-DPB1P04440 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 LINC02447-202ENST00000501888 2146 ntBASIC14.77□□□□□ -0.05
HLA-DPB1P04440 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DPB1P04440 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.76□□□□□ -0.05
HLA-DPB1P04440 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 SCARNA2-201ENST00000458748 420 ntBASIC14.76□□□□□ -0.05
HLA-DPB1P04440 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 POU5F1P6-201ENST00000466990 990 ntBASIC14.76□□□□□ -0.05
HLA-DPB1P04440 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 AC064862.7-201ENST00000604520 867 ntBASIC14.76□□□□□ -0.05
HLA-DPB1P04440 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 AL691432.3-201ENST00000621860 400 ntBASIC14.76□□□□□ -0.05
HLA-DPB1P04440 AL022326.1-202ENST00000641533 845 ntBASIC14.76□□□□□ -0.05
HLA-DPB1P04440 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DPB1P04440 AC112504.1-201ENST00000623415 1841 ntBASIC14.76□□□□□ -0.05
HLA-DPB1P04440 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DPB1P04440 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms