Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.78□□□□□ -0.2
CD74P04233 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CD74P04233 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.78□□□□□ -0.2
CD74P04233 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.78□□□□□ -0.2
CD74P04233 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.78□□□□□ -0.2
CD74P04233 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CD74P04233 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CD74P04233 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD74P04233 AC023908.3-201ENST00000564211 3047 ntBASIC13.77□□□□□ -0.2
CD74P04233 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD74P04233 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CD74P04233 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.77□□□□□ -0.21
CD74P04233 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CD74P04233 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
CD74P04233 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.77□□□□□ -0.21
CD74P04233 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.77□□□□□ -0.21
CD74P04233 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.77□□□□□ -0.21
CD74P04233 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CD74P04233 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.77□□□□□ -0.21
CD74P04233 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.77□□□□□ -0.21
CD74P04233 AC087641.1-201ENST00000557561 1021 ntBASIC13.77□□□□□ -0.21
CD74P04233 AL136038.3-201ENST00000561909 1096 ntBASIC13.77□□□□□ -0.21
CD74P04233 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CD74P04233 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.77□□□□□ -0.21
CD74P04233 AL139424.1-201ENST00000607572 797 ntBASIC13.77□□□□□ -0.21
CD74P04233 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.77□□□□□ -0.21
CD74P04233 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 U82695.1-201ENST00000635752 1889 ntBASIC13.77□□□□□ -0.21
CD74P04233 AF228730.7-201ENST00000641842 219 ntBASIC13.77□□□□□ -0.21
CD74P04233 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
CD74P04233 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD74P04233 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CD74P04233 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.77□□□□□ -0.21
CD74P04233 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.76□□□□□ -0.21
CD74P04233 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.76□□□□□ -0.21
CD74P04233 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.76□□□□□ -0.21
CD74P04233 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CD74P04233 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.76□□□□□ -0.21
CD74P04233 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.76□□□□□ -0.21
CD74P04233 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.76□□□□□ -0.21
CD74P04233 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.76□□□□□ -0.21
CD74P04233 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.76□□□□□ -0.21
CD74P04233 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 NSUN5P1-202ENST00000421140 1535 ntBASIC13.76□□□□□ -0.21
CD74P04233 NSUN5P2-203ENST00000457352 1529 ntBASIC13.76□□□□□ -0.21
CD74P04233 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 ARMC10P1-201ENST00000313754 855 ntBASIC13.76□□□□□ -0.21
CD74P04233 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.76□□□□□ -0.21
CD74P04233 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.76□□□□□ -0.21
CD74P04233 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.76□□□□□ -0.21
CD74P04233 AC063952.2-201ENST00000498792 1227 ntBASIC13.76□□□□□ -0.21
CD74P04233 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.76□□□□□ -0.21
CD74P04233 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.76□□□□□ -0.21
CD74P04233 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 AC012306.2-201ENST00000609350 630 ntBASIC13.76□□□□□ -0.21
CD74P04233 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CD74P04233 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.76□□□□□ -0.21
CD74P04233 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
CD74P04233 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
CD74P04233 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CD74P04233 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD74P04233 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms