Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MT-ND3P03897 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MT-ND3P03897 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.74■□□□□ 0.27
MT-ND3P03897 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.74■□□□□ 0.27
MT-ND3P03897 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.74■□□□□ 0.27
MT-ND3P03897 AC098831.1-202ENST00000438821 336 ntBASIC16.74■□□□□ 0.27
MT-ND3P03897 PRYP5-201ENST00000451909 266 ntBASIC16.74■□□□□ 0.27
MT-ND3P03897 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MT-ND3P03897 AC092865.5-201ENST00000545435 363 ntBASIC16.74■□□□□ 0.27
MT-ND3P03897 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.74■□□□□ 0.27
MT-ND3P03897 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.74■□□□□ 0.27
MT-ND3P03897 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
MT-ND3P03897 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.74■□□□□ 0.27
MT-ND3P03897 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.74■□□□□ 0.27
MT-ND3P03897 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.74■□□□□ 0.27
MT-ND3P03897 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.74■□□□□ 0.27
MT-ND3P03897 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.74■□□□□ 0.27
MT-ND3P03897 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND3P03897 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-ND3P03897 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MT-ND3P03897 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.73■□□□□ 0.27
MT-ND3P03897 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-ND3P03897 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
MT-ND3P03897 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-ND3P03897 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 KRT8P39-201ENST00000396270 1433 ntBASIC16.73■□□□□ 0.27
MT-ND3P03897 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-ND3P03897 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
MT-ND3P03897 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
MT-ND3P03897 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 MIR940-201ENST00000401276 94 ntBASIC16.73■□□□□ 0.27
MT-ND3P03897 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-ND3P03897 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-ND3P03897 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.73■□□□□ 0.27
MT-ND3P03897 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.73■□□□□ 0.27
MT-ND3P03897 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.73■□□□□ 0.27
MT-ND3P03897 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-ND3P03897 AC006557.2-201ENST00000592985 1240 ntBASIC16.73■□□□□ 0.27
MT-ND3P03897 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 MIR1199-201ENST00000621445 119 ntBASIC16.73■□□□□ 0.27
MT-ND3P03897 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-ND3P03897 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-ND3P03897 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-ND3P03897 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.73■□□□□ 0.27
MT-ND3P03897 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND3P03897 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
MT-ND3P03897 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-ND3P03897 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.72■□□□□ 0.27
MT-ND3P03897 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.72■□□□□ 0.27
MT-ND3P03897 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.72■□□□□ 0.27
MT-ND3P03897 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
MT-ND3P03897 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-ND3P03897 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MT-ND3P03897 AC068418.2-201ENST00000577309 3703 ntBASIC16.72■□□□□ 0.27
MT-ND3P03897 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-ND3P03897 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MT-ND3P03897 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.72■□□□□ 0.27
MT-ND3P03897 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.72■□□□□ 0.27
MT-ND3P03897 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-ND3P03897 BX842568.4-201ENST00000421222 227 ntBASIC16.72■□□□□ 0.27
MT-ND3P03897 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-ND3P03897 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.72■□□□□ 0.27
MT-ND3P03897 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.72■□□□□ 0.27
MT-ND3P03897 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MT-ND3P03897 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 Z83851.2-201ENST00000609564 659 ntBASIC16.72■□□□□ 0.27
MT-ND3P03897 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-ND3P03897 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND3P03897 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms