Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 C20orf181-201ENST00000623918 480 ntBASIC19.01■□□□□ 0.63
CDKL5O76039 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CDKL5O76039 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
CDKL5O76039 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19■□□□□ 0.63
CDKL5O76039 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDKL5O76039 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL5O76039 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19■□□□□ 0.63
CDKL5O76039 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL5O76039 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL5O76039 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL5O76039 AL603832.2-201ENST00000566195 2125 ntBASIC19■□□□□ 0.63
CDKL5O76039 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL5O76039 YBX2P1-201ENST00000394192 760 ntBASIC19■□□□□ 0.63
CDKL5O76039 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL5O76039 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19■□□□□ 0.63
CDKL5O76039 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19■□□□□ 0.63
CDKL5O76039 TFAMP1-201ENST00000412727 736 ntBASIC19■□□□□ 0.63
CDKL5O76039 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19■□□□□ 0.63
CDKL5O76039 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19■□□□□ 0.63
CDKL5O76039 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CDKL5O76039 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CDKL5O76039 AC105233.2-201ENST00000523697 349 ntBASIC19■□□□□ 0.63
CDKL5O76039 AF228730.5-201ENST00000530288 346 ntBASIC19■□□□□ 0.63
CDKL5O76039 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19■□□□□ 0.63
CDKL5O76039 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19■□□□□ 0.63
CDKL5O76039 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19■□□□□ 0.63
CDKL5O76039 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDKL5O76039 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL5O76039 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL5O76039 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL5O76039 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19■□□□□ 0.63
CDKL5O76039 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDKL5O76039 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19■□□□□ 0.63
CDKL5O76039 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19■□□□□ 0.63
CDKL5O76039 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDKL5O76039 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 AC011270.2-201ENST00000624293 2550 ntBASIC18.99■□□□□ 0.63
CDKL5O76039 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CDKL5O76039 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.99■□□□□ 0.63
CDKL5O76039 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.99■□□□□ 0.63
CDKL5O76039 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.99■□□□□ 0.63
CDKL5O76039 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CDKL5O76039 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.99■□□□□ 0.63
CDKL5O76039 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CDKL5O76039 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CDKL5O76039 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CDKL5O76039 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CDKL5O76039 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CDKL5O76039 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 MKNK2P1-201ENST00000437526 628 ntBASIC18.99■□□□□ 0.63
CDKL5O76039 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.99■□□□□ 0.63
CDKL5O76039 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.99■□□□□ 0.63
CDKL5O76039 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.99■□□□□ 0.63
CDKL5O76039 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CDKL5O76039 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CDKL5O76039 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CDKL5O76039 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.99■□□□□ 0.63
CDKL5O76039 AC024909.3-201ENST00000611513 2257 ntBASIC18.99■□□□□ 0.63
CDKL5O76039 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL5O76039 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.98■□□□□ 0.63
CDKL5O76039 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL5O76039 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL5O76039 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL5O76039 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL5O76039 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL5O76039 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms