Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNF13O43567 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.95□□□□□ -0.02
RNF13O43567 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 FAM185BP-201ENST00000443595 716 ntBASIC14.95□□□□□ -0.02
RNF13O43567 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF13O43567 CXCL1P1-201ENST00000502804 216 ntBASIC14.95□□□□□ -0.02
RNF13O43567 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF13O43567 UNC93B6-202ENST00000528242 690 ntBASIC14.95□□□□□ -0.02
RNF13O43567 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF13O43567 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.95□□□□□ -0.02
RNF13O43567 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RNF13O43567 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF13O43567 GPAA1P2-202ENST00000606848 1787 ntBASIC14.95□□□□□ -0.02
RNF13O43567 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF13O43567 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF13O43567 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF13O43567 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.94□□□□□ -0.02
RNF13O43567 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.94□□□□□ -0.02
RNF13O43567 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.94□□□□□ -0.02
RNF13O43567 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RNF13O43567 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 CRYGEP-201ENST00000412192 528 ntBASIC14.94□□□□□ -0.02
RNF13O43567 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.94□□□□□ -0.02
RNF13O43567 AL513480.1-201ENST00000451731 511 ntBASIC14.94□□□□□ -0.02
RNF13O43567 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.94□□□□□ -0.02
RNF13O43567 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF13O43567 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF13O43567 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
RNF13O43567 AL603832.2-201ENST00000566195 2125 ntBASIC14.94□□□□□ -0.02
RNF13O43567 MIR4515-201ENST00000584082 81 ntBASIC14.94□□□□□ -0.02
RNF13O43567 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.94□□□□□ -0.02
RNF13O43567 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.94□□□□□ -0.02
RNF13O43567 ACTL9-202ENST00000612068 1252 ntBASIC14.94□□□□□ -0.02
RNF13O43567 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.94□□□□□ -0.02
RNF13O43567 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF13O43567 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
RNF13O43567 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RNF13O43567 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF13O43567 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
RNF13O43567 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF13O43567 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF13O43567 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RNF13O43567 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.94□□□□□ -0.02
RNF13O43567 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF13O43567 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RNF13O43567 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RNF13O43567 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF13O43567 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF13O43567 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RNF13O43567 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.93□□□□□ -0.02
RNF13O43567 PCGF3-213ENST00000620529 1899 ntBASIC14.93□□□□□ -0.02
RNF13O43567 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF13O43567 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF13O43567 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF13O43567 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.93□□□□□ -0.02
RNF13O43567 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF13O43567 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.93□□□□□ -0.02
RNF13O43567 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RNF13O43567 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RNF13O43567 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF13O43567 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RNF13O43567 VN2R19P-201ENST00000442399 1052 ntBASIC14.93□□□□□ -0.02
RNF13O43567 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RNF13O43567 AC009078.2-202ENST00000463353 338 ntBASIC14.93□□□□□ -0.02
RNF13O43567 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RNF13O43567 RNA5SP415-201ENST00000517246 115 ntBASIC14.93□□□□□ -0.02
RNF13O43567 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms