Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TO15178 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.07■□□□□ 0
TO15178 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TO15178 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.07■□□□□ 0
TO15178 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
TO15178 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 AC006449.6-201ENST00000612330 2296 ntBASIC15.07■□□□□ 0
TO15178 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 KRT18P32-201ENST00000424695 1287 ntBASIC15.07■□□□□ 0
TO15178 FAM58DP-201ENST00000428076 619 ntBASIC15.07■□□□□ 0
TO15178 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.07■□□□□ 0
TO15178 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.07■□□□□ 0
TO15178 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.07■□□□□ 0
TO15178 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.07■□□□□ 0
TO15178 AP001160.2-201ENST00000596071 487 ntBASIC15.07■□□□□ 0
TO15178 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.07■□□□□ 0
TO15178 HYMAI-201ENST00000635591 3347 ntBASIC15.07■□□□□ 0
TO15178 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.07■□□□□ 0
TO15178 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.07■□□□□ 0
TO15178 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TO15178 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TO15178 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 CYP2T1P-202ENST00000641596 2535 ntBASIC15.07■□□□□ 0
TO15178 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.07■□□□□ 0
TO15178 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.07■□□□□ 0
TO15178 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 AC006449.5-201ENST00000610658 2098 ntBASIC15.07■□□□□ 0
TO15178 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
TO15178 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.07■□□□□ 0
TO15178 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TO15178 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TO15178 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.07■□□□□ 0
TO15178 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TO15178 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TO15178 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TO15178 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.06■□□□□ 0
TO15178 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TO15178 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
TO15178 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.06■□□□□ 0
TO15178 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.06■□□□□ 0
TO15178 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TO15178 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.06■□□□□ 0
TO15178 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TO15178 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TO15178 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.06■□□□□ 0
TO15178 PCDH8P1-201ENST00000428983 2773 ntBASIC15.06■□□□□ 0
TO15178 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TO15178 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TO15178 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TO15178 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.06■□□□□ 0
TO15178 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
TO15178 HLA-H-201ENST00000383620 1096 ntBASIC15.06■□□□□ 0
TO15178 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.06■□□□□ 0
TO15178 GPS2P2-201ENST00000430745 888 ntBASIC15.06■□□□□ 0
TO15178 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.06■□□□□ 0
TO15178 AC245100.5-201ENST00000452108 331 ntBASIC15.06■□□□□ 0
TO15178 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TO15178 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.06■□□□□ 0
TO15178 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.06■□□□□ 0
TO15178 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.06■□□□□ 0
TO15178 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TO15178 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.06■□□□□ 0
TO15178 AC024267.1-201ENST00000582320 895 ntBASIC15.06■□□□□ 0
TO15178 AL596442.2-201ENST00000610240 980 ntBASIC15.06■□□□□ 0
TO15178 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.06■□□□□ 0
TO15178 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.06■□□□□ 0
TO15178 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TO15178 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.06■□□□□ 0
TO15178 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TO15178 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.06■□□□□ 0
TO15178 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TO15178 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.06■□□□□ 0
TO15178 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TO15178 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TO15178 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TO15178 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TO15178 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.06■□□□□ 0
TO15178 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.06■□□□□ 0
TO15178 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.06■□□□□ 0
TO15178 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.06■□□□□ 0
TO15178 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TO15178 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TO15178 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.06■□□□□ 0
TO15178 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.06■□□□□ 0
TO15178 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.05■□□□□ 0
TO15178 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TO15178 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.05■□□□□ 0
TO15178 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
TO15178 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms