Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
PDLIM1O00151 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
PDLIM1O00151 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PDLIM1O00151 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.66■□□□□ 0.1
PDLIM1O00151 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.65■□□□□ 0.1
PDLIM1O00151 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
PDLIM1O00151 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PDLIM1O00151 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PDLIM1O00151 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.65■□□□□ 0.1
PDLIM1O00151 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
PDLIM1O00151 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.65■□□□□ 0.1
PDLIM1O00151 GGT3P-204ENST00000453783 1664 ntBASIC15.65■□□□□ 0.1
PDLIM1O00151 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.65■□□□□ 0.1
PDLIM1O00151 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 RCN1P2-201ENST00000398357 915 ntBASIC15.65■□□□□ 0.1
PDLIM1O00151 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PDLIM1O00151 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
PDLIM1O00151 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.65■□□□□ 0.1
PDLIM1O00151 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.65■□□□□ 0.1
PDLIM1O00151 AC096582.2-201ENST00000510860 516 ntBASIC15.65■□□□□ 0.1
PDLIM1O00151 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 AL732292.2-201ENST00000609649 430 ntBASIC15.65■□□□□ 0.1
PDLIM1O00151 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PDLIM1O00151 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PDLIM1O00151 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PDLIM1O00151 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
PDLIM1O00151 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PDLIM1O00151 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PDLIM1O00151 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PDLIM1O00151 AL353593.2-201ENST00000602529 1483 ntBASIC15.65■□□□□ 0.1
PDLIM1O00151 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDLIM1O00151 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.64■□□□□ 0.1
PDLIM1O00151 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.64■□□□□ 0.09
PDLIM1O00151 INTS4P1-201ENST00000438455 1935 ntBASIC15.64■□□□□ 0.09
PDLIM1O00151 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.64■□□□□ 0.09
PDLIM1O00151 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.64■□□□□ 0.09
PDLIM1O00151 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.64■□□□□ 0.09
PDLIM1O00151 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.64■□□□□ 0.09
PDLIM1O00151 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.64■□□□□ 0.09
PDLIM1O00151 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.64■□□□□ 0.09
PDLIM1O00151 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
PDLIM1O00151 AC091304.2-201ENST00000564639 760 ntBASIC15.64■□□□□ 0.09
PDLIM1O00151 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.64■□□□□ 0.09
PDLIM1O00151 MIR5100-201ENST00000579544 119 ntBASIC15.64■□□□□ 0.09
PDLIM1O00151 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PDLIM1O00151 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.64■□□□□ 0.09
PDLIM1O00151 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.64■□□□□ 0.09
PDLIM1O00151 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
PDLIM1O00151 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.64■□□□□ 0.09
PDLIM1O00151 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
PDLIM1O00151 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.64■□□□□ 0.09
PDLIM1O00151 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.64■□□□□ 0.09
PDLIM1O00151 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PDLIM1O00151 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PDLIM1O00151 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.64■□□□□ 0.09
PDLIM1O00151 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
PDLIM1O00151 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDLIM1O00151 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms