Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC188H7C350 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCDC188H7C350 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC188H7C350 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC188H7C350 ATP5G2P1-201ENST00000433580 426 ntBASIC17.03■□□□□ 0.32
CCDC188H7C350 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC188H7C350 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC188H7C350 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC188H7C350 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 AC069148.1-201ENST00000608741 768 ntBASIC17.03■□□□□ 0.32
CCDC188H7C350 AL355877.3-201ENST00000622820 899 ntBASIC17.03■□□□□ 0.32
CCDC188H7C350 NORAD-201ENST00000565493 5339 ntBASIC17.03■□□□□ 0.32
CCDC188H7C350 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CCDC188H7C350 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC188H7C350 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC188H7C350 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC188H7C350 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC188H7C350 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC188H7C350 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC188H7C350 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC188H7C350 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC188H7C350 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.02■□□□□ 0.32
CCDC188H7C350 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CCDC188H7C350 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC188H7C350 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC188H7C350 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC188H7C350 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC188H7C350 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CCDC188H7C350 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CCDC188H7C350 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC188H7C350 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC188H7C350 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC188H7C350 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC188H7C350 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC188H7C350 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC188H7C350 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC188H7C350 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC188H7C350 AL109954.1-202ENST00000564051 2148 ntBASIC17.02■□□□□ 0.32
CCDC188H7C350 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC188H7C350 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC188H7C350 AC063926.3-201ENST00000624734 5658 ntBASIC17.02■□□□□ 0.32
CCDC188H7C350 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CCDC188H7C350 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC188H7C350 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC188H7C350 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC188H7C350 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC188H7C350 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.02■□□□□ 0.32
CCDC188H7C350 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC188H7C350 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC188H7C350 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC188H7C350 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.02■□□□□ 0.32
CCDC188H7C350 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC188H7C350 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC188H7C350 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CCDC188H7C350 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC188H7C350 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC188H7C350 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC188H7C350 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CCDC188H7C350 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC188H7C350 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC188H7C350 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC188H7C350 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.02■□□□□ 0.31
CCDC188H7C350 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC188H7C350 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC188H7C350 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC188H7C350 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.02■□□□□ 0.31
CCDC188H7C350 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC188H7C350 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC188H7C350 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC188H7C350 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC188H7C350 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CCDC188H7C350 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CCDC188H7C350 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CCDC188H7C350 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 HAUS4P1-201ENST00000406739 1145 ntBASIC17.01■□□□□ 0.31
CCDC188H7C350 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CCDC188H7C350 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.01■□□□□ 0.31
CCDC188H7C350 SART3-203ENST00000546611 1184 ntBASIC17.01■□□□□ 0.31
CCDC188H7C350 AL049597.2-201ENST00000565575 961 ntBASIC17.01■□□□□ 0.31
CCDC188H7C350 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC188H7C350 AC006557.2-201ENST00000592985 1240 ntBASIC17.01■□□□□ 0.31
CCDC188H7C350 AP000550.4-202ENST00000639755 178 ntBASIC17.01■□□□□ 0.31
CCDC188H7C350 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms