Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 SCN5A-205ENST00000423572 8362 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 SRP19-202ENST00000445150 833 ntTSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 SERP1-205ENST00000487153 657 ntTSL 4 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 AC024257.2-201ENST00000549699 147 ntBASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 UBE2DNL-204ENST00000602536 740 ntBASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 MIR4466-201ENST00000606121 54 ntBASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 MIR6084-201ENST00000622012 110 ntBASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 AC008694.1-202ENST00000636953 945 ntBASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 NGRN-202ENST00000379095 7237 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 BEND3P1-201ENST00000421591 1944 ntBASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 CSPG4P13-202ENST00000567704 4801 ntBASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 AC010536.3-201ENST00000620306 533 ntBASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CHKB-CPT1BH3BT56 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms