Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RCCD1A6NED2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCCD1A6NED2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.39■□□□□ 0.37
RCCD1A6NED2 MIR4515-201ENST00000584082 81 ntBASIC17.39■□□□□ 0.37
RCCD1A6NED2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RCCD1A6NED2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RCCD1A6NED2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCCD1A6NED2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.39■□□□□ 0.37
RCCD1A6NED2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.39■□□□□ 0.37
RCCD1A6NED2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCCD1A6NED2 AL109954.1-202ENST00000564051 2148 ntBASIC17.39■□□□□ 0.37
RCCD1A6NED2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.39■□□□□ 0.37
RCCD1A6NED2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.39■□□□□ 0.37
RCCD1A6NED2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCCD1A6NED2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RCCD1A6NED2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RCCD1A6NED2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCCD1A6NED2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RCCD1A6NED2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCCD1A6NED2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 AC108073.2-201ENST00000464002 357 ntBASIC17.38■□□□□ 0.37
RCCD1A6NED2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 AL356488.2-201ENST00000602755 427 ntBASIC17.38■□□□□ 0.37
RCCD1A6NED2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 AC008735.5-201ENST00000623544 497 ntBASIC17.38■□□□□ 0.37
RCCD1A6NED2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RCCD1A6NED2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RCCD1A6NED2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 RNPS1P1-201ENST00000507437 918 ntBASIC17.37■□□□□ 0.37
RCCD1A6NED2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 RN7SL371P-201ENST00000578099 267 ntBASIC17.37■□□□□ 0.37
RCCD1A6NED2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 AL031055.1-201ENST00000606362 631 ntBASIC17.37■□□□□ 0.37
RCCD1A6NED2 AC012313.10-201ENST00000623509 926 ntBASIC17.37■□□□□ 0.37
RCCD1A6NED2 TP73-AS1-207ENST00000624167 988 ntBASIC17.37■□□□□ 0.37
RCCD1A6NED2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms