Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 AL133373.2-201ENST00000623187 2828 ntBASIC18.71■□□□□ 0.59
SSC5DA1L4H1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 AC010328.2-201ENST00000597698 1111 ntBASIC18.71■□□□□ 0.59
SSC5DA1L4H1 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
SSC5DA1L4H1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
SSC5DA1L4H1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.71■□□□□ 0.58
SSC5DA1L4H1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 RHOXF1P1-202ENST00000635473 501 ntBASIC18.7■□□□□ 0.58
SSC5DA1L4H1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.7■□□□□ 0.58
SSC5DA1L4H1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 AC000095.1-201ENST00000603208 874 ntBASIC18.69■□□□□ 0.58
SSC5DA1L4H1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 RNF216P1-203ENST00000404404 2427 ntBASIC18.69■□□□□ 0.58
SSC5DA1L4H1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 AC134312.5-201ENST00000568031 1313 ntBASIC18.69■□□□□ 0.58
SSC5DA1L4H1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.69■□□□□ 0.58
SSC5DA1L4H1 AC105020.1-201ENST00000435356 2205 ntBASIC18.69■□□□□ 0.58
SSC5DA1L4H1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSC5DA1L4H1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSC5DA1L4H1 AC136604.1-201ENST00000418535 575 ntBASIC18.68■□□□□ 0.58
SSC5DA1L4H1 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSC5DA1L4H1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.68■□□□□ 0.58
SSC5DA1L4H1 AC093433.1-201ENST00000458048 571 ntBASIC18.68■□□□□ 0.58
SSC5DA1L4H1 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.68■□□□□ 0.58
SSC5DA1L4H1 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SSC5DA1L4H1 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.68■□□□□ 0.58
SSC5DA1L4H1 RN7SL560P-201ENST00000577943 264 ntBASIC18.68■□□□□ 0.58
SSC5DA1L4H1 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms