Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 KRT18P34-201ENST00000488218 1270 ntBASIC18.67■□□□□ 0.58
CLIC4Q9Y696 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 SLC25A1P1-201ENST00000528351 927 ntBASIC18.67■□□□□ 0.58
CLIC4Q9Y696 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 AL513190.1-201ENST00000621254 727 ntBASIC18.67■□□□□ 0.58
CLIC4Q9Y696 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 AC073439.1-201ENST00000624121 1774 ntBASIC18.67■□□□□ 0.58
CLIC4Q9Y696 AP003680.1-201ENST00000598970 3660 ntBASIC18.67■□□□□ 0.58
CLIC4Q9Y696 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 AC008677.1-201ENST00000519230 1561 ntBASIC18.67■□□□□ 0.58
CLIC4Q9Y696 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLIC4Q9Y696 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC4Q9Y696 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 AL590627.1-203ENST00000421194 1026 ntBASIC18.65■□□□□ 0.58
CLIC4Q9Y696 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.65■□□□□ 0.58
CLIC4Q9Y696 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 AC092865.6-201ENST00000642101 219 ntBASIC18.65■□□□□ 0.58
CLIC4Q9Y696 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLIC4Q9Y696 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms