Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 ATP5G2P1-201ENST00000433580 426 ntBASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 AP001350.2-201ENST00000625104 1094 ntBASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 PCDHA3-202ENST00000532566 4594 ntBASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 AP002414.2-201ENST00000591780 3365 ntBASIC15.71■□□□□ 0.11
NIPSNAP3AQ9UFN0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.71■□□□□ 0.1
NIPSNAP3AQ9UFN0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NIPSNAP3AQ9UFN0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NIPSNAP3AQ9UFN0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 SLC22A20-204ENST00000530038 1673 ntBASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 FOSL1P1-201ENST00000511041 816 ntBASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 AL358472.4-201ENST00000633140 710 ntBASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 AP005117.1-202ENST00000581724 1908 ntBASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 LINC02447-202ENST00000501888 2146 ntBASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC104640.1-201ENST00000562617 2109 ntBASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
NIPSNAP3AQ9UFN0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NIPSNAP3AQ9UFN0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NIPSNAP3AQ9UFN0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.69■□□□□ 0.1
NIPSNAP3AQ9UFN0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPSNAP3AQ9UFN0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NIPSNAP3AQ9UFN0 CDC14C-201ENST00000428251 1719 ntBASIC15.69■□□□□ 0.1
NIPSNAP3AQ9UFN0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPSNAP3AQ9UFN0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NIPSNAP3AQ9UFN0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NIPSNAP3AQ9UFN0 AC144831.1-201ENST00000573312 2656 ntBASIC15.69■□□□□ 0.1
NIPSNAP3AQ9UFN0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
NIPSNAP3AQ9UFN0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms