Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 AC244107.1-201ENST00000442033 332 ntBASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 GAPDHP21-201ENST00000450301 1010 ntBASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 AC135586.1-201ENST00000539323 574 ntBASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 AC004840.1-201ENST00000636359 365 ntBASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 AC005622.1-201ENST00000636801 1703 ntBASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 AC007541.1-201ENST00000570282 1469 ntBASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 AC009053.2-201ENST00000563701 2365 ntBASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 AC106886.4-201ENST00000623557 2502 ntBASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 LINC01144-201ENST00000626198 1710 ntBASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 SERBP1P3-201ENST00000459980 809 ntBASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 BTBD7P1-201ENST00000447253 1453 ntBASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRIT1Q9P2V4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms