Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN4Q9NRR5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN4Q9NRR5 AL513523.2-202ENST00000427283 2040 ntBASIC15.07■□□□□ 0
UBQLN4Q9NRR5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.07■□□□□ 0
UBQLN4Q9NRR5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN4Q9NRR5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBQLN4Q9NRR5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
UBQLN4Q9NRR5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.07■□□□□ 0
UBQLN4Q9NRR5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.07■□□□□ 0
UBQLN4Q9NRR5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 ADH5P3-201ENST00000433842 1137 ntBASIC15.06■□□□□ 0
UBQLN4Q9NRR5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 AC105233.2-201ENST00000523697 349 ntBASIC15.06■□□□□ 0
UBQLN4Q9NRR5 AF228730.5-201ENST00000530288 346 ntBASIC15.06■□□□□ 0
UBQLN4Q9NRR5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 AC008267.7-201ENST00000624570 1194 ntBASIC15.06■□□□□ 0
UBQLN4Q9NRR5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBQLN4Q9NRR5 ELL2P1-201ENST00000413990 1906 ntBASIC15.05■□□□□ 0
UBQLN4Q9NRR5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBQLN4Q9NRR5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 BX842568.4-201ENST00000421222 227 ntBASIC15.05■□□□□ -0
UBQLN4Q9NRR5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 AC073389.1-201ENST00000595595 795 ntBASIC15.05■□□□□ -0
UBQLN4Q9NRR5 AL365330.1-201ENST00000607459 531 ntBASIC15.05■□□□□ -0
UBQLN4Q9NRR5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 AL589702.1-201ENST00000641229 1509 ntBASIC15.05■□□□□ -0
UBQLN4Q9NRR5 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.05■□□□□ -0
UBQLN4Q9NRR5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms