Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SPDYE8P-202ENST00000612377 668 ntBASIC14.36□□□□□ -0.11
CDH20Q9HBT6 AC023511.2-201ENST00000618803 211 ntBASIC14.36□□□□□ -0.11
CDH20Q9HBT6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 AKAP8P1-201ENST00000434743 1349 ntBASIC14.36□□□□□ -0.11
CDH20Q9HBT6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 PCGF3-213ENST00000620529 1899 ntBASIC14.35□□□□□ -0.11
CDH20Q9HBT6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 GGT4P-201ENST00000623672 1708 ntBASIC14.35□□□□□ -0.11
CDH20Q9HBT6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 ELL2P1-201ENST00000413990 1906 ntBASIC14.35□□□□□ -0.11
CDH20Q9HBT6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 AC103702.1-201ENST00000548801 2630 ntBASIC14.35□□□□□ -0.11
CDH20Q9HBT6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 RPSAP43-201ENST00000402237 625 ntBASIC14.35□□□□□ -0.11
CDH20Q9HBT6 MIR1233-2-201ENST00000408138 82 ntBASIC14.35□□□□□ -0.11
CDH20Q9HBT6 MIR1233-1-201ENST00000408722 82 ntBASIC14.35□□□□□ -0.11
CDH20Q9HBT6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 AC112482.1-201ENST00000492080 688 ntBASIC14.35□□□□□ -0.11
CDH20Q9HBT6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.35□□□□□ -0.11
CDH20Q9HBT6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH20Q9HBT6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 AC079328.2-201ENST00000561241 3354 ntBASIC14.34□□□□□ -0.11
CDH20Q9HBT6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 TFAMP1-201ENST00000412727 736 ntBASIC14.34□□□□□ -0.11
CDH20Q9HBT6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 TIMM8BP1-201ENST00000452384 211 ntBASIC14.34□□□□□ -0.11
CDH20Q9HBT6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH20Q9HBT6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms