Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 AC020765.3-201ENST00000613051 740 ntBASIC20.17■□□□□ 0.82
UPF2Q9HAU5 AC010654.1-201ENST00000615722 808 ntBASIC20.17■□□□□ 0.82
UPF2Q9HAU5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 OR2I1P-210ENST00000642037 4691 ntBASIC20.17■□□□□ 0.82
UPF2Q9HAU5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 AC092850.2-201ENST00000623821 2697 ntBASIC20.16■□□□□ 0.82
UPF2Q9HAU5 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 BX005266.1-201ENST00000473402 457 ntBASIC20.16■□□□□ 0.82
UPF2Q9HAU5 AC064862.7-201ENST00000604520 867 ntBASIC20.16■□□□□ 0.82
UPF2Q9HAU5 AL139424.1-201ENST00000607572 797 ntBASIC20.16■□□□□ 0.82
UPF2Q9HAU5 AP001350.2-201ENST00000625104 1094 ntBASIC20.16■□□□□ 0.82
UPF2Q9HAU5 AL022326.1-202ENST00000641533 845 ntBASIC20.16■□□□□ 0.82
UPF2Q9HAU5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UPF2Q9HAU5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 AC087163.2-201ENST00000457299 853 ntBASIC20.15■□□□□ 0.82
UPF2Q9HAU5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 MIR5100-201ENST00000579544 119 ntBASIC20.15■□□□□ 0.82
UPF2Q9HAU5 CYP2A7P1-201ENST00000595391 815 ntBASIC20.15■□□□□ 0.82
UPF2Q9HAU5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPF2Q9HAU5 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
UPF2Q9HAU5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
UPF2Q9HAU5 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC20.14■□□□□ 0.82
UPF2Q9HAU5 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC20.14■□□□□ 0.82
UPF2Q9HAU5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.14■□□□□ 0.82
UPF2Q9HAU5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UPF2Q9HAU5 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
UPF2Q9HAU5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPF2Q9HAU5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
UPF2Q9HAU5 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPF2Q9HAU5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.14■□□□□ 0.81
UPF2Q9HAU5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.14■□□□□ 0.81
UPF2Q9HAU5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.14■□□□□ 0.81
UPF2Q9HAU5 RCN1P1-201ENST00000400413 996 ntBASIC20.14■□□□□ 0.81
UPF2Q9HAU5 AL031133.1-201ENST00000406807 723 ntBASIC20.14■□□□□ 0.81
UPF2Q9HAU5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.14■□□□□ 0.81
UPF2Q9HAU5 AP002383.4-201ENST00000442518 975 ntBASIC20.14■□□□□ 0.81
UPF2Q9HAU5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms