Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PIF1Q9H611 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.71■□□□□ 0.11
PIF1Q9H611 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
PIF1Q9H611 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.71■□□□□ 0.11
PIF1Q9H611 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 NCF1C-201ENST00000438382 1427 ntBASIC15.71■□□□□ 0.11
PIF1Q9H611 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.71■□□□□ 0.11
PIF1Q9H611 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PIF1Q9H611 AP005117.1-202ENST00000581724 1908 ntBASIC15.71■□□□□ 0.11
PIF1Q9H611 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.71■□□□□ 0.11
PIF1Q9H611 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PIF1Q9H611 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PIF1Q9H611 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.71■□□□□ 0.11
PIF1Q9H611 AC132008.2-207ENST00000454517 770 ntBASIC15.71■□□□□ 0.11
PIF1Q9H611 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.71■□□□□ 0.11
PIF1Q9H611 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.71■□□□□ 0.11
PIF1Q9H611 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.71■□□□□ 0.11
PIF1Q9H611 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.71■□□□□ 0.11
PIF1Q9H611 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.71■□□□□ 0.11
PIF1Q9H611 AC138894.3-201ENST00000603787 634 ntBASIC15.71■□□□□ 0.11
PIF1Q9H611 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.71■□□□□ 0.11
PIF1Q9H611 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.71■□□□□ 0.11
PIF1Q9H611 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.71■□□□□ 0.11
PIF1Q9H611 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PIF1Q9H611 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PIF1Q9H611 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.71■□□□□ 0.1
PIF1Q9H611 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.71■□□□□ 0.1
PIF1Q9H611 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PIF1Q9H611 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
PIF1Q9H611 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PIF1Q9H611 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.71■□□□□ 0.1
PIF1Q9H611 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.7■□□□□ 0.1
PIF1Q9H611 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
PIF1Q9H611 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.7■□□□□ 0.1
PIF1Q9H611 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.7■□□□□ 0.1
PIF1Q9H611 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PIF1Q9H611 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PIF1Q9H611 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PIF1Q9H611 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.7■□□□□ 0.1
PIF1Q9H611 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.7■□□□□ 0.1
PIF1Q9H611 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.7■□□□□ 0.1
PIF1Q9H611 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.7■□□□□ 0.1
PIF1Q9H611 MIR4492-201ENST00000581627 80 ntBASIC15.7■□□□□ 0.1
PIF1Q9H611 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.7■□□□□ 0.1
PIF1Q9H611 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.7■□□□□ 0.1
PIF1Q9H611 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
PIF1Q9H611 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
PIF1Q9H611 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PIF1Q9H611 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.7■□□□□ 0.1
PIF1Q9H611 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.7■□□□□ 0.1
PIF1Q9H611 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.7■□□□□ 0.1
PIF1Q9H611 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 AC013268.4-201ENST00000637413 2228 ntBASIC15.7■□□□□ 0.1
PIF1Q9H611 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PIF1Q9H611 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.7■□□□□ 0.1
PIF1Q9H611 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.69■□□□□ 0.1
PIF1Q9H611 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PIF1Q9H611 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.69■□□□□ 0.1
PIF1Q9H611 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms