Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 AC087641.1-201ENST00000557561 1021 ntBASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 AL445228.2-201ENST00000605589 952 ntBASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 REXO1L3P-201ENST00000622202 1288 ntBASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 AC092384.3-202ENST00000564646 2873 ntBASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 LINC02447-202ENST00000501888 2146 ntBASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.52□□□□□ -0.08
COMMD4Q9H0A8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
COMMD4Q9H0A8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.52□□□□□ -0.08
COMMD4Q9H0A8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
COMMD4Q9H0A8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.52□□□□□ -0.08
COMMD4Q9H0A8 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.52□□□□□ -0.08
COMMD4Q9H0A8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
COMMD4Q9H0A8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
COMMD4Q9H0A8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.52□□□□□ -0.08
COMMD4Q9H0A8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.52□□□□□ -0.08
COMMD4Q9H0A8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
COMMD4Q9H0A8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.52□□□□□ -0.08
COMMD4Q9H0A8 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
COMMD4Q9H0A8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.52□□□□□ -0.08
COMMD4Q9H0A8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 MIR648-201ENST00000385046 94 ntBASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 AC092119.3-201ENST00000612618 583 ntBASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 CDC14C-201ENST00000428251 1719 ntBASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COMMD4Q9H0A8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 SBF1P1-201ENST00000444527 5631 ntBASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 ARMC10P1-201ENST00000313754 855 ntBASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.51□□□□□ -0.09
COMMD4Q9H0A8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms