Protein–RNA interactions for Protein: Q9BYU1

PBX4, Pre-B-cell leukemia transcription factor 4, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4Q9BYU1 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 NUS1P3-201ENST00000423502 862 ntBASIC17.16■□□□□ 0.34
PBX4Q9BYU1 AC007969.1-201ENST00000433675 447 ntBASIC17.16■□□□□ 0.34
PBX4Q9BYU1 AC005077.2-201ENST00000449786 690 ntBASIC17.16■□□□□ 0.34
PBX4Q9BYU1 Z93015.1-201ENST00000451718 390 ntBASIC17.16■□□□□ 0.34
PBX4Q9BYU1 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 AP001063.1-201ENST00000568332 529 ntBASIC17.16■□□□□ 0.34
PBX4Q9BYU1 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 GNRHR2-203ENST00000581100 1187 ntBASIC17.16■□□□□ 0.34
PBX4Q9BYU1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 AC005252.2-201ENST00000624630 1141 ntBASIC17.16■□□□□ 0.34
PBX4Q9BYU1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.16■□□□□ 0.34
PBX4Q9BYU1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 AL138688.1-201ENST00000624851 1594 ntBASIC17.15■□□□□ 0.34
PBX4Q9BYU1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 AL662890.1-201ENST00000396818 632 ntBASIC17.15■□□□□ 0.34
PBX4Q9BYU1 AC074338.1-201ENST00000416825 156 ntBASIC17.15■□□□□ 0.34
PBX4Q9BYU1 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 C2orf27AP3-201ENST00000434123 579 ntBASIC17.15■□□□□ 0.34
PBX4Q9BYU1 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 EIF4HP1-201ENST00000453115 687 ntBASIC17.15■□□□□ 0.34
PBX4Q9BYU1 UPF3AP2-201ENST00000457924 1132 ntBASIC17.15■□□□□ 0.34
PBX4Q9BYU1 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 U62317.3-201ENST00000608319 855 ntBASIC17.15■□□□□ 0.34
PBX4Q9BYU1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 AL354718.3-201ENST00000616414 581 ntBASIC17.15■□□□□ 0.34
PBX4Q9BYU1 CR382287.1-201ENST00000623954 586 ntBASIC17.15■□□□□ 0.34
PBX4Q9BYU1 AC138028.6-201ENST00000616106 1482 ntBASIC17.15■□□□□ 0.34
PBX4Q9BYU1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PBX4Q9BYU1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
PBX4Q9BYU1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 CNN2P8-201ENST00000421872 913 ntBASIC17.14■□□□□ 0.33
PBX4Q9BYU1 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 FNTAP2-201ENST00000430308 634 ntBASIC17.14■□□□□ 0.33
PBX4Q9BYU1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.14■□□□□ 0.33
PBX4Q9BYU1 AL591846.1-201ENST00000451736 433 ntBASIC17.14■□□□□ 0.33
PBX4Q9BYU1 SCARNA20.5-201ENST00000516991 142 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms